Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0021
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Entry
YPDSF_0021 CDS
T00505
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPDSF_0021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_0021
Enzymes [BR:
ypp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
YPDSF_0021
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPDSF_0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
ABP38448
LinkDB
All DBs
Position
complement(24652..25224)
Genome browser
AA seq
190 aa
AA seq
DB search
MSLQRCGWVTSDPLYLAYHDTEWGVPLKDSRALFEMICLEGQQAGLSWITVLKKREHYRK
SFHHFDPVKVAKMGPEEVEIRVQDSGIIRHRGKIQAIITNAQAYLAMEANGEDFSRFIWS
FVDDEPKINHWWCLAEAPATTAVSDAMSKALKKRGFKFIGSTICYAFMQASGLVNDHMAN
CFCHPDNAVK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcaacgctgtggttgggttacctcagatccgctttatctggcttaccacgac
accgaatggggggtgccactcaaagatagccgggcattgtttgaaatgatttgtctggaa
gggcaacaagcggggctgtcatggataaccgtgctcaaaaaacgggagcattaccgcaaa
agcttccatcattttgatccggttaaggtggcgaaaatggggcctgaagaggtagaaata
cgggtacaagacagcggaattatccgccatcgcggtaaaatccaagccatcattaccaac
gcacaggcttatttagcgatggaagccaacggcgaagacttctcacgctttatctggagt
tttgttgatgatgagccaaaaattaaccattggtggtgtctggcagaagccccggcaaca
accgccgtctctgatgccatgtctaaggccttgaaaaaacgcggatttaaattcattgga
tcgacgatttgttatgcttttatgcaggccagcggcttggtgaacgatcacatggcaaat
tgtttttgccacccagataatgcagtgaaatga
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