Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0040
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Entry
YPDSF_0040 CDS
T00505
Name
(GenBank) selenocysteine-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ypp03012
]
YPDSF_0040
Translation factors [BR:
ypp03012
]
Eukaryotic type
Elongation factors
YPDSF_0040
Prokaryotic type
YPDSF_0040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABP38467
LinkDB
All DBs
Position
48255..50207
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AA seq
650 aa
AA seq
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MIIVTAGHVDHGKTTLLQAITGVNADRLPEEKQRGMTIDLGYAYWPLPDGRIMGFIDVPG
HEKFLANMLAGGGGIDHALLVVACDDGVMAQTREHLAILRLSGRPALTVALTKADRVDDE
RIAQVHQQILQELVAQGWSAEQISLFVTAAVTERGIGELREHLAQCHQQRDPKGRLQRRF
RLAIDRVFSVKGAGLVVTGTALAGQVAVGDTLWLTGGDCPVRVRGIHAQNQPAQQAQAGQ
RIALNISGDISKQQINRGDWLLAQPPLPPVDRVLVTVDADTPLQHWQPLHLYHGARHITG
RFSLLGHQQLIDDQQPLIDHQQIINNQSTSGGHSSQILAELLLDSPLWLVENDRVILRDI
GAKKTLGGARVIHLAVPSRGKRQPAYLAWLTALAQATSDREVLDLHLAQGPVSVRTFSWA
RQLTDNEMAALLAATDTVVAGDIALSHPHAQQAQQTLLHVLALYHQQHGDQLGLGRARLR
RMALPTLDEGVVFRLIDNLLAEGALHNTRGWLHLPEHGLAFTEQEQIGWQQAAPYFVDDP
WWVRDLAAELQAAEGEMRSLLRKAAQLGYITAVVTDRYYLSQRIEQLADLVRELDSRQGS
VSAADFRDRLGIGRKLAIQILEFFDRSGFTRRRGNGHILRDSGLFSATGS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcaccgcaggccatgtcgatcatggcaaaaccacacttttacaggccatt
accggggtcaatgcggatcggttgccggaagagaagcagcgggggatgaccatcgatctg
ggctatgcctactggccacttcctgatggccgtatcatgggttttattgacgtccccggt
catgagaagtttttggcgaacatgttggcgggggggggcggtattgatcacgctctgttg
gtggtggcctgtgatgatggcgtgatggcgcagacccgtgaacatctggcgattttgcgg
ctgagtggtcggccagcgctaacggtggcattgaccaaagcggatcgggttgatgatgag
cgcattgcacaggtccatcagcaaattttgcaggagttggtggcacaaggctggtcagcg
gagcagatcagtctgtttgtcacggcggccgtcactgagcgtggtatcggtgagttacgt
gagcatctggcgcaatgtcatcagcaacgtgacccgaagggccgattacagcggcgtttt
cgtctggccattgaccgggtattcagcgtaaaaggggctggcttagtggtgacggggacc
gcgttggcgggccaggtggcggtaggcgataccctgtggttgactggcggtgattgcccc
gtgcgggtgcgaggtattcatgcccagaaccaaccggcacagcaggcgcaagccggccag
cgcattgccctgaatatcagcggtgatatcagtaagcagcaaatcaaccgcggtgattgg
ttattggcgcagccaccgttgccaccggtggatcgggtgctggtaaccgttgatgccgat
acgccgttacaacactggcagcccttacatctgtatcatggggctcgccatattacgggc
cgtttttcactgctaggtcaccagcagttaattgacgaccaacaaccgttaattgaccat
caacaaatcataaataatcaatccacatcaggcggtcattcctctcagattctggccgag
ttgctgctggacagccctctgtggctggtagaaaacgaccgggtgatcttgcgtgatatc
ggggcgaagaaaaccttgggtggcgcacgggtgattcatctggcggtgccatcacgtggt
aaacggcaaccggcgtatctggcttggttaaccgcactggcccaggcgacgagtgaccga
gaggtgttggatttacatttggcgcaagggccggtctcggtgcgcacatttagttgggcg
cgccagcttactgacaatgagatggcggcattactggcggcgaccgatactgtcgtcgcc
ggggacattgcgctatcacatcctcacgcacagcaagcgcaacagaccctcttgcatgta
ctcgccctctatcaccaacagcatggcgatcagttggggttagggcgggcgcgtttgcga
cgtatggctttaccgacgctggacgaaggggtggtattccgtctgattgataacttgctg
gcggagggagcgttacacaacacccgtgggtggttacatctgccagaacatggtttagcg
tttactgagcaagagcagatagggtggcaacaagcggcaccttactttgttgatgaccct
tggtgggtgcgtgacttagcggccgagttgcaagctgcagagggtgaaatgcgcagccta
ttacgcaaagcggcgcaactgggttatatcactgcggttgtgacggatcgttattatctg
agccaacgcattgagcagcttgctgatttggtacgtgagttagatagccgccaggggagt
gtcagtgccgcagatttccgtgatcgactcggtattggtcgcaaactggcgatccaaatt
cttgaattctttgaccgcagtggtttcacccgccgccggggtaatggccatatattgcga
gatagcggcctgttttctgcgacaggttcttga
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