KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0539
Entry
YPDSF_0539        CDS       T00505                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11900  type VI secretion system protein ImpC
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypp02044]
    YPDSF_0539
Secretion system [BR:ypp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YPDSF_0539
SSDB
Motif
Pfam: VipB VipB_2 ConA_BAM2
Other DBs
NCBI-ProteinID: ABP38950
LinkDB
Position
601562..603106
AA seq 514 aa
MSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDE
RVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWR
GVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIA
AAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANYFD
RAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTN
ASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETRE
FEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAH
YLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN
PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtctgtacaggaaaaccgtgcgcagggtactgcgacgaccgtattaaagaatagccct
gcggcacaaggggtttacgccgccttgtttgaaaaaatcaacctgagcccggtctcctca
ctggccggtatcgaggcgttccagaacaacgatgcgctggcggaagccaccaccgatgag
cgcgttaccgccgccgtcagtgtctttttagacctgctgaagcagtcggcgaagaaagta
gaaaaactggataaaaccctgctggacggccatattgccgcactggatgaccaaatcagc
cgccagttggacgcggtaatgcaccaccccgatttccagcgggtggaatcgacctggcgt
ggtgtgaagtcgctgatcgatcagaccgatttccgccagaacgtgcgcatcgagctgctg
gatatcagtaaagatcatctggtgcaggattttgaagatgccccggaaatctcacaaagc
ggtttatacgcccagacctatattcaggaatacgacacccccggcggcgagccgattgcc
gcggctatctccaactacgagttcgaccgtagcccgcaagatatcgcgttattgcgcaat
atctccaaggtcgcggcggcagcccatatgccgtttatcggttccgttggccccgagttc
tttggtaaagagaacatggaagacgtggcagccatcaaagatatcgccaactactttgac
cgtgctgaatacatcaagtggaaagccttccgcgactcggatgattcccgctatatcggc
ctgaccatgccgcgcgtgctggggcgtttgccttacggcccggacacggtgccggtacgc
agcttcaactacgttgagcaggtgaaagggccggatcatgatcgctacttgtggaccaat
gcctcatttgcctttgctgctaacatggtgaaaagcttcattaaaaatggctggtgtgtg
cagatccggggcccgcaggccggtggtgcggtcaccaacttaccgatccacctgtacgat
ctgggtaccggtaatcaggtcaaaattccgtcagaggtgatgatcccggaaacccgcgag
ttcgagtttgccaatctgggctttatcccgctgtcgtactacaaaaaccgcgattactcg
tgcttcttctcggccaactcggcgcagaaaccggcgctgtatgacaccgcggatgccacg
gccaacagccgcatcaacgcccgtttgccgtatatcttcctgctgtcgcgcattgcccat
tatctgaaactgatccagcgcgagaacatcggcaccaccaaagatcgccgtctgctggag
ctagagctgaacaactgggtgcgcgggctggtgacggaaatgactgatccgggtgatgat
ttgcaggcgtcccatcccctgcgtgatgccaaagtgacggtcgaagatatcgaagacaac
cccggcttcttccgcgtcaagctgtatgcggtgccgcatttccaggtggaagggatggac
gtcaatctgtcattggtttcccaaatgccaaaggctaaggcataa

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