Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0562
Help
Entry
YPDSF_0562 CDS
T00505
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPDSF_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_0562
Enzymes [BR:
ypp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
YPDSF_0562
DNA repair and recombination proteins [BR:
ypp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPDSF_0562
Prokaryotic type
YPDSF_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ABP38972
LinkDB
All DBs
Position
complement(630793..631911)
Genome browser
AA seq
372 aa
AA seq
DB search
MMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRF
PDIQALAAAPLDDVLHLWTGLGYYARARNLHKAAQMVVEHHQGEFPTTFDQILALPGIGR
STAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGVGQ
FNQAMMDLGAMVCTRSKPKCELCPLNIGCMAYANHSWARYPGKKPKQTLPEKTAWFLLMQ
NGSQVWLEQRPPVGLWGGLFCFPQFAEQEELIHWLQKQGIPANETQQLTAFRHTFSHFHL
DIVPIWLNTASVRGCMDDGAGLWYNLAQPPSVGLAAPVERLLHQLLKDPLAKDELTQQQL
TKQSPTQPALFD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagcgcaacaattcgcgcacgtggtacttgattggtaccaacactttggccgc
aaaaccctgccatggcagttggataagaccccctatcaagtatggctgtcagaagtgatg
ttgcaacaaactcaggttgcgaccgtcatcccctattttcaacgttttatgctgcgcttc
cctgatattcaggcactggcggctgcgccgttggatgatgtactgcatttatggaccggt
ttgggttactacgcccgtgccagaaacctgcataaagcggcccaaatggtcgtggaacac
catcaaggggagtttcccacaacatttgaccagatactggcattgccgggtatcgggcgc
tcaactgccggggctattttatcgctgtctttaggccagcattttcctattttggatggc
aacgtcaaacgggtgctggcccgttgctatgccgttgacggctggccgggaaaaaaagag
gtcgaaggccgcctgtggcaaatcagcgaagatgtcacacccgccaacggggtgggccag
tttaatcaggcaatgatggatttaggcgcgatggtgtgtactcgctctaaacctaaatgt
gaactttgcccattgaatatcggctgtatggcgtacgctaaccacagttgggcgcgctat
ccgggcaaaaaacctaaacagacgttgccggaaaaaaccgcctggttcttattaatgcaa
aatggatcgcaagtgtggctcgaacagcgccccccagtcggcttatggggcggcttattc
tgtttcccacaatttgctgaacaagaagaactcattcactggctgcaaaaacagggtatt
cccgccaatgaaacccagcagttaaccgcgtttcgccatacgtttagtcatttccatctg
gatatagtccctatatggctaaatacggcctcagtccgaggatgcatggatgatggcgca
ggtctctggtataacttagcccagccaccttcggtagggttagctgctccggttgagcgt
ttattgcatcagttattaaaagatccgttggcaaaagatgagttaacgcaacaacaactc
acaaagcaatcgcctacccaaccagctttatttgactag
DBGET
integrated database retrieval system
