Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0788
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Entry
YPDSF_0788 CDS
T00505
Name
(GenBank) peptide transport periplasmic protein precursor
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp01503
Cationic antimicrobial peptide (CAMP) resistance
ypp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YPDSF_0788
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
YPDSF_0788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypp02000
]
YPDSF_0788
Transporters [BR:
ypp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
YPDSF_0788
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABP39194
LinkDB
All DBs
Position
complement(892455..894101)
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AA seq
548 aa
AA seq
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MRGLLILLLSLICLATPVLAQPVAAEQPLPDIRQRGFVYCVSGILNTFNPQMASSGLTVD
TLAAQLYDRLLDVDPYTYRLIPELAESWQVLDNGATYRFHLRKDVPFQTTDWFTPTRMMN
ADDVVFSFQRVFDSKHPYHKVNGGEYPYFDSLQFASAVKSVKKLDDYTVEFKLKAPDASF
LWHLATHYAPVLSSEYADVLTQKGKEEQIDREPVGTGPFLLDEYRSGQYIRLFRNSHYWK
GVPRMPQVVIDLGVGGTGRLSKLLTGECDVLAYPAASQLSILRDDPPRLRLTLRPGMNVA
YLAFNTRKPPLSDQRVRQAIALSINNQRLMQSIYYGTAETAASILPRASWAYDNQAQVTE
YNPEKAKEILKDLGITQLQLNLWVPTASQSYNPSPLKTAELIQADLAQVGISVTIVPVEG
RFQEARLMEMNHDLTLSGWSTDSNDPDSFFRPLLSCAAIRSQTNYAHWCDPAFDELLQKA
LRSQQLSERIEYYQQAQRILEQQLPLLPLASSLRLQAYRYDIKGLVLSPFGNSSFAGVYR
ESDEGKTP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtttactgattttgctgttgtcgctgatttgccttgcaacccctgtgctggca
caacctgttgcagcggagcaaccgctaccggatatccgtcagcgcggatttgtctattgt
gtcagtgggatactcaacacatttaacccccaaatggccagtagcggtttaaccgtcgat
acacttgcagcacaactctatgaccgtctactggatgttgacccctatacctaccggtta
atcccagaactggcggaaagttggcaagttctggataacggcgcaacctaccgttttcat
ttacgtaaagatgtgccatttcagactaccgactggtttacgcctacgcggatgatgaac
gccgatgatgtggtcttcagttttcagcgagtatttgactcaaagcatccgtaccacaag
gtcaacggcggagagtacccctactttgatagtttgcagtttgcaagcgccgtaaaaagc
gtaaaaaaattggatgattacaccgttgaatttaagctaaaagccccagatgcgtcgttt
ctttggcatttagcaactcattacgcccccgtattgtcttcagaatacgccgatgtcctg
acccagaaagggaaggaagaacagattgaccgtgagccagtcgggaccgggccttttcta
ttggatgaatatcgttctgggcaatatatccgcttgttccgcaacagccactattggaaa
ggtgtgccacgtatgccacaggtggttatcgacttaggggtcggtggaacggggcgttta
tcaaaactgttgaccggagagtgtgatgtgctggcctatcccgccgccagccaattatct
attttacgtgatgacccaccacgcctacgcctgacactgcgccctgggatgaacgtcgcc
tatctcgccttcaatacccgcaagcccccgttaagtgatcaacgggttcgccaagcgatc
gctttgtcgatcaataaccaacgattgatgcaatcaatctattacggcacagctgaaacg
gcagcctctattttacctagagcatcatgggcttatgataatcaggcgcaggtgaccgaa
tataatccggaaaaagccaaagagatcctcaaagatttggggataacccaactgcaactt
aacttatgggtccctactgcatcgcaatcttataatcctagcccattgaaaactgctgaa
ttgatccaagcggatttagcacaagtggggatttccgtcactattgttcccgtcgagggc
cgtttccaagaggcccgtctgatggagatgaaccacgatctgacactttccggttggtct
actgacagtaatgaccccgacagtttcttccggccattattaagctgtgcagcaattcgt
tcgcaaacaaactatgctcactggtgtgatccggcctttgatgaattactgcaaaaggca
ttacgttcccaacaattatcggagcgtattgagtattatcagcaggctcagcgtattctg
gagcaacaattgccgttactgccactggcatcgtccctgcggcttcaggcataccgttat
gacattaaaggcttggtattaagcccgttcggtaactcttctttcgccggtgtataccgc
gaaagcgatgagggcaagacgccatga
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