Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0886
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Entry
YPDSF_0886 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPDSF_0886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypp02000
]
YPDSF_0886
02044 Secretion system [BR:
ypp02044
]
YPDSF_0886
Transporters [BR:
ypp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YPDSF_0886
Secretion system [BR:
ypp02044
]
Type I secretion system
RTX toxin transporter
YPDSF_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_18
AAA_22
Zeta_toxin
AAA_5
DUF87
AAA_33
PRK
APS_kinase
Cytidylate_kin
AAA_29
AAA_30
AAA_21
CPT
Mg_chelatase
AAA_28
Pex24p
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ABP39286
LinkDB
All DBs
Position
complement(1010123..1011907)
Genome browser
AA seq
594 aa
AA seq
DB search
MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVR
FKIRKQALEKIRQEQLPLAFRDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMW
GGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQFLALISPLFFQVIMDKVLVHH
ALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR
HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLVLFIVMWCISPLLTLIILSTLPFYLL
LAVMTTRPLQKKVEALCGFAAQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQA
NFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMSVQLSIGQLIAFNMLALQALMPMSK
LVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL
HDLNLSIRAGEHIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQV
GVVMQESYLFNRTVRENIAHSRPTATLTEVVNAASLAGANAFILALRESPDLNF
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcatgttcattccgcgctgatatgtgcatccagactgattcggttggccggg
ttaaatccaatggatatcgagacatttagccaaaaggtcgccatagacacctcagtaaaa
acaacgctagcgtctcttcagcgttatatcgttcaattttcacaaacagcttctgtccgt
tttaaaatacgtaagcaagcattggaaaaaataaggcaggagcagttaccgctggcattt
cgtgaccgtcaggggaattttatcttgctggcgcggatgaatgaacaacaagtgttatta
cagtacgctgatgataaaaaaccacaaatgttaagttatcaatcacttgctgacatgtgg
ggtggaatgatcttatgctgtagtcattcgcgctttgatattcgctggtttatcccgcca
ctacgtcgccatcgtaagccattaatgcaagtcctattgttatcattattgctgcaattc
ctagcgttgatctcccctctcttttttcaagttatcatggacaaagtactcgttcatcat
gcattaaccacactggaagtgctaatcttcatcttagtcattgtcggtgtgtatgaggtt
atattaaaaggcttgcgagaatatattttcacgcatacgacaacacgagtggatatatta
ttaggcgggaagttgtttcaacatttaatcaggttgccgttaagttactttaaacaacgt
catgtcggtaatattgttgccagagtccgtgagttagataatatccgtgatttcatcacg
ggttcggccctgacattatgtgttgatgtggtttttaccctcgtgttgtttattgttatg
tggtgtatatccccgttattaaccttaataatactgagcacgttgcctttttatctgtta
ttggccgtgatgaccactcggccgttgcaaaaaaaagtagaagctctctgtggttttgcc
gcgcaaaacggcgcgtttttgactgaaacggtgtctggggtggaaaccgtaaaaagtttg
gcgctggagccacggatgcgccagcgctgggaaagccaaactcgtgattttgctcaggct
aattttcaggtacaaaatttgcaaaatctcagtagccaagcggctcaactcttgcaaaag
gtggctggcgcactggtgatcgtgataggtgcgtatcacgttatgtctgtacagctcagt
attggtcagttgattgcatttaatatgttggcactacaggcattaatgccgatgagtaaa
ctggttgatttatggcagcagagcatccgtgctcaggttgggctgaaattaatatcagat
attctaagcttgccggttgaaccggaggcagatccggcggccccgcaccctgcgattagc
ggcaatatcctactaaaaaatgtggccttccgttatcgccccgatcttgatcctgtctta
catgatttaaacttatctatccgcgcgggtgaacatatcgggttggtggggccgtcagga
tcggggaaaagcaccgtggcccggttattacaacggctctataacaccgaacaaggggtc
attacgatagatggttatccgatcaaccatttatcaccagaatatttacggcgacaagtg
ggggtggtgatgcaggaaagctatctgtttaaccgcaccgtgcgagaaaatattgcccat
tcacggccaacagccaccttgaccgaggtggtcaatgccgccagtttagcgggtgctaac
gcctttattttggcgctacgcgaatccccggatcttaatttttga
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