Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0958
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Entry
YPDSF_0958 CDS
T00505
Name
(GenBank) nucleoid protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ypp03036
]
YPDSF_0958
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_0958
Chromosome and associated proteins [BR:
ypp03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
YPDSF_0958
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YPDSF_0958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
TetR_C_24
DUF4288
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
ABP39358
LinkDB
All DBs
Position
1086355..1086783
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AA seq
142 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESQSQAEIEERARKLQQ
YREMLIADGIDPNELLQASAAAKAAGKAKRAARPAKYQYKDENGELKTWTGQGRTPAVIK
KAIEEQGKSLDDFLLEPVHNSV
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcgttaaaaattcttaacaacatccgtactctacgtgctcaagcgcgcgaa
tgcactcttgaaacactagaagaaatgcttgagaagcttgaagtggtcgttaatgaacgc
cgcgaagaagaatctcaatcacaagcagaaattgaagagcgtgcacgtaaattgcaacaa
taccgtgaaatgcttattgctgacggtattgatccaaatgaactgctacaagcttcagct
gctgctaaagctgctggtaaagcaaaacgtgctgcacgtcctgctaaatatcagtataaa
gatgagaatggcgaactgaaaacttggacaggccaaggccgtactcctgcagtgattaag
aaggccattgaagagcaaggcaaatcactggatgacttcctgttggagcctgtccataat
tctgtgtaa
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