Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1047
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Entry
YPDSF_1047 CDS
T00505
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00061
Fatty acid biosynthesis
ypp00071
Fatty acid degradation
ypp01100
Metabolic pathways
ypp01212
Fatty acid metabolism
ypp02024
Quorum sensing
ypp04146
Peroxisome
Module
ypp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
YPDSF_1047
00071 Fatty acid degradation
YPDSF_1047
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
YPDSF_1047
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPDSF_1047
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ypp01004
]
YPDSF_1047
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypp04147
]
YPDSF_1047
Enzymes [BR:
ypp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
YPDSF_1047
Lipid biosynthesis proteins [BR:
ypp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
YPDSF_1047
Exosome [BR:
ypp04147
]
Exosomal proteins
Exosomal proteins of breast milk
YPDSF_1047
Exosomal proteins of breast cancer cells
YPDSF_1047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABP39447
LinkDB
All DBs
Position
complement(1178035..1179756)
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AA seq
573 aa
AA seq
DB search
MATNNNFRSVTLEKVWLKRYPADVPAEIDPDRYSSLIEMFENAALRYADQPAFINMGEVM
TFRKLEERSRAFAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGVLRAGMIVVNVNPLYT
PRELEHQLSDSGAVAIVIVSNFAHTLEKVVFKTQVRHVILTRMGDQLSAAKGTLVNFVVK
YIKRLVPKYYLPDAISFRTVLQKGRRMQYVKPDVINTDTAFLQYTGGTTGVAKGAILTHR
NMQSNLEQAKAAYAPLLQPGRDLVVTALPLYHIFALTVNCLLFIELGGRSLLITNPRDIP
GMVKELSRYPFTAITGVNTLFNALLNNEEFTHLDFSTLRLSVGGGMPVQKAVAEKWETLT
GKHLLEGYGLTECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLRDDDGNDVELGKPGELWV
RGPQVMLGYWQRPDATDDVLKDGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNE
IEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKKDASLTPEELLTHCRRYLTGYKVPKI
VEFRDELPKSNVGKILRRELRDEEVKVGTTDAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaataataattttaggagtgttaccttggaaaaagtatggctaaagcgctat
ccggcagatgtccccgcagagattgatccggaccgctattcatctttgatagaaatgttt
gagaacgcggcgttgcgttatgcggaccaacccgcatttattaatatgggcgaggtcatg
acttttcgtaagctggaagagcgcagccgtgcttttgctgcctatctacagcaaggtctg
gggttacagaaaggtgaccgtgttgcactgatgatgccaaatttactgcaatatcctatc
gctttgtttggtgttctgcgggcaggtatgattgtcgtgaatgttaatccgctgtatacc
ccgcgtgaacttgagcatcaacttagtgatagcggagccgtggccatcgttattgtttcc
aacttcgcccacacactggaaaaagttgtctttaaaacccaggtccggcatgtgattttg
acccgaatgggtgatcaactctcggcagcaaaagggacgttggttaacttcgtggtgaaa
tacattaagcgtctggtgccgaagtactatctgcccgatgccatttcatttcgtaccgta
ttgcaaaaagggcgtcgaatgcaatacgtcaaaccggatgttatcaacacggatacggca
ttcttgcaatataccggcgggactacgggtgtcgcgaaaggtgccatattgacacaccgc
aacatgcaatcaaatctggaacaggcaaaagcggcctatgcaccgttgcttcaacctggc
cgtgatttggtggtcacggctctgcctctctaccatatctttgcattgacggtaaattgc
ctgctatttatcgagttgggggggcgcagtttattgataaccaacccacgagatatcccc
ggtatggttaaagaactgagtcgttatccatttaccgcgataacaggggtcaatacgtta
tttaatgcattattgaataatgaagagtttacccatttggatttctccaccttgcgcctt
tcggtgggcggcggtatgccagtgcagaaagccgtggccgaaaagtgggaaacgctgacg
ggtaagcatctactggagggttacggtttgactgaatgctcacctttagttaccggtaac
ccttatgatctgaaacattacagcggcagtattggtttaccggtaccttcgacagatgtt
cggctgcgcgatgatgatggcaatgacgtagaattaggcaagccgggtgaactatgggtg
cgtgggccacaagttatgttaggctattggcagcggccagatgccacggatgacgtcctg
aaagacggctggctggcgacaggtgatattgcgacgatggatgaggacggtttcttgcgc
atcgttgaccgcaagaaggacatgattctggtttctggttttaacgtctaccccaatgag
attgaagaggtggtagcgttacatgcgaaagtgctggagtctgctgtgattggcgtgcct
aatgaggtctccggcgaggcagtaaaagtctttgttgttaaaaaagatgcatcactgaca
cctgaagaattactaacgcattgccgtcgctaccttaccgggtataaagtaccgaaaatt
gtagagttccgtgacgaattgccgaagtcgaatgtgggtaaaatattgcgcagggaacta
cgtgacgaagaagttaaggtgggtacgacagacgcagcttaa
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