Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1057
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Entry
YPDSF_1057 CDS
T00505
Name
(GenBank) hex regulon repressor
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypp03000
]
YPDSF_1057
Transcription factors [BR:
ypp03000
]
Prokaryotic type
Helix-turn-helix
Other families
YPDSF_1057
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GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
MarR
HTH_Tnp_ISL3
HTH_29
HTH_Crp_2
HTH_36
Penicillinase_R
TrmB
NTP_transf_3
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ABP39455
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Position
1188422..1189447
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AA seq
341 aa
AA seq
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MKIRHRSYYGEKGLLLTLCHCQRVPARSIFSLNRHRFLLYMKSVKPMGGSRYMNTLENIQ
NSMDLLSKSERKVAEVILASPQTAIHSSIATLAKMANVSEPTVNRFCRRLETKGFPDFKL
HLAQSLANGTPYVNRNVEEDDSVAAYTGKIFESTMASLDRVKNNLDIAAINRAVDLLTQA
KKISFFGLGSSAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGDVVVLISHTGRT
KSLVELAQLARENDAAVIAITSCDTPLANEATLSLLLDVPEDTDMYMPMVSRIAQLTLID
VLATGFTLRRGAKFRDNLKRVKEALKESRFDKDSLPVNNGD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagacacaggtcatattatggtgaaaaaggcttacttctcaccctatgccac
tgccaacgggtaccagctcgtagtatattttcattaaaccggcatagatttctcctttat
atgaaatcggtaaaacccatgggtggctctcgttatatgaatacgctggaaaatatccaa
aatagtatggaccttctgagcaaatcagaaaggaaagtcgccgaggtaatccttgcctcc
ccgcaaacggccatccattctagtatcgctacacttgccaaaatggcgaatgtcagcgaa
ccgacagtcaaccgtttttgccgtcgtctggagaccaaaggtttccctgattttaaactg
catttggcgcaaagtctggcgaacggtacaccctatgtgaatcgtaacgtcgaagaagat
gatagtgtagctgcgtacaccggaaaaatttttgaatcgacgatggccagcttggaccgc
gtaaaaaacaatctggatatcgccgccattaaccgggctgtcgatttattgactcaagcg
aaaaaaatctcgttctttggcctgggttcctccgctgccgttgctcatgatgcgatgaat
aagtttttccgctttaatatcccagtaatttatttcgatgacatcgttatgcaacgcatg
agttgtatgaactcaagcgaaggcgatgtggtagtgttgatctcccacacagggcgaacc
aaaagcctggtggagctggcgcagttggctcgtgaaaatgatgctgccgtgattgccata
acttcatgtgatacgccactggccaacgaagcaaccttatcgctgttgctggatgtgccg
gaagataccgatatgtatatgccaatggtgtcacgcatcgcccagctcacgttgattgat
gtgctggcaacgggcttcaccctacggcgcggagcaaaatttagggataatttgaagcgg
gttaaagaggcattgaaagaatctcgttttgataaggattctttgccagtaaacaacggt
gattaa
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