Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1094
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Entry
YPDSF_1094 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPDSF_1094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypp02000
]
YPDSF_1094
Transporters [BR:
ypp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
YPDSF_1094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_10
Motif
Other DBs
NCBI-ProteinID:
ABP39492
LinkDB
All DBs
Position
1232620..1233702
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AA seq
360 aa
AA seq
DB search
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQK
YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD
AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN
NGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV
FLNWLIQADTQKALNEAFGSTPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacactgataacgctaatgagcgggctgttattcagttcgctaacactcgca
gcccagaccagcgactgggactctgtggttgcgcaggcaaaaaaagaaggcagcgtgact
tttaacgtttggtatctacaaccacagtggcgcagttttgtgaaaaattttgaacaaaag
tacgacatcaaggtgcgtattccagaaggcagcattgacggcaatatgaacaaattgctg
gcagagacacgccgggagcaagggaagatcgatgtcattgccctctctatcgcacaatta
ccgatcacgatgggcgcgaaatcactggctaaagtggatgatttaccgggttatcaggat
gcgtatcaccagttacagaacgtcgatacccaaggttacgccgtagcattctggggcaac
cagaccggttttgcctacgatccccaacagatgggtgatcgaccattgccacagaccatg
gaggaactccaacgttttatcgacgccaatccgaagcggttcggttataacgatccgaac
aacgggggggcgggggaagcctttatccaacgcatcgtcaccacgctgagcggcgacttt
agcagcgagtctgacactgttgacccaacggtaataaaaaactggcagaaaggttggcag
tggtttgcgtccaataataacaatattacccgcacggcgtccggtgccgatagcctgaca
cgcctcaacgatggcgaactgatgctgacacctgcctgggaagaccacctttccggctta
caaaagaccggcgcaatcacctccaggttgaaattctatgtgcctgagtttggtatgccc
ggcggtggcaatattgccagtatcgcagccaacagcccgcacccggcggcctccagagtg
ttcctaaactggctgattcaggcagatacccagaaagcgctgaacgaggcgttcggttcc
accccaatgaacaagcaactgaatgctgatgtaaaacagcctgacacacccgttcagttt
tacggtaaggcgtacagtatgcagatgaaaaaagagtttgctcgtcaggtaatgacacga
taa
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integrated database retrieval system
