Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1283
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Entry
YPDSF_1283 CDS
T00505
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp02020
Two-component system
ypp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPDSF_1283
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YPDSF_1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypp03021
]
YPDSF_1283
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ypp02035
]
YPDSF_1283
Transcription machinery [BR:
ypp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPDSF_1283
Bacterial motility proteins [BR:
ypp02035
]
Flagellar system
Flagellar assembly proteins
Stator
YPDSF_1283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
YcbB
UPF0147
Motif
Other DBs
NCBI-ProteinID:
ABP39674
LinkDB
All DBs
Position
complement(1447340..1448062)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIDLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVASAMQQVEQRVGRPATEQEV
AQVLDIGLVEYRQILLDTNNSQLFSYDEWREEHGESVEPLLEGHEDANPLKHLLEGNLRQ
RVIDAIEALPEREKMVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRARLNNDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatttgtataccgccgaaggcgtgatggataagaattccctctggaaacgctat
gttcctttggttcgccatgaagcattgcgtctacaggtgcgtctacccgccagcgtggag
ttggacgatttattgcaggctggggggattgacctgctgaatgctgtcgagcgctatgat
gctttacaaggcaccgcgtttactacgtatgcggtacagcgcatacggggggcgatgttg
gatgaactgcgtagccgtgattgggcgcctcgcagtgtgcgccgtaatgcacgggaagtg
gccagtgccatgcagcaagtcgaacagcgagtagggcgtccggcgaccgaacaggaagtc
gcgcaggttcttgatattggcttggttgagtaccgccagatcctgttggacaccaacaat
agccaacttttctcctacgacgaatggcgtgaagagcacggcgaaagtgtcgagcccctg
ttagaagggcatgaagatgccaatccactaaaacacttgttggaaggtaatctgcgtcag
cgcgtgattgacgcgatagaggcgttaccagaacgcgaaaaaatggtgcttacgttgtat
taccaggaagagctgaatttgaaagaaattggtgcggtgcttgaagttggggagtcccgc
gtcagtcaacttcacagccaagcgataaaacgcttacgcgcccgcctaaataacgacgct
taa
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