Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1290
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Entry
YPDSF_1290 CDS
T00505
Name
(GenBank) glycosidase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPDSF_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_1290
Enzymes [BR:
ypp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
YPDSF_1290
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPDSF_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
CNNM
Motif
Other DBs
NCBI-ProteinID:
ABP39681
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All DBs
Position
1456642..1457253
Genome browser
AA seq
203 aa
AA seq
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MFYTYGETEINHLKRRDKKMAAAIERLGMLERPLSPDLFAALIRNIVDQQISVKAAQTVN
TRLTLLLGSITPATVAAASAEAIQRCGMTMRKAGYIKGAADAAINGSLDLSVIAQLPDNE
VITQLSRLDGVGVWTAEMLLISSLSRPDIVSWGDLAIRRGMMNLYRHKTLPRERFERYRR
RYTPYGTTASLYLWALSHKTLED
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgttctatacctacggcgaaacagaaataaatcatctgaaacggcgggataaaaaaatg
gccgcagctattgagcgtttggggatgttagagcgcccattatcgccggacttattcgct
gcattgatcagaaatattgttgatcagcaaatttcagttaaagcggcgcaaaccgttaat
acacgcttaaccctattattgggtagcatcacccccgccaccgttgccgctgcctccgcc
gaggcgattcaacgctgtggtatgaccatgaggaaagcgggttatattaaaggggcggcc
gatgcggccattaatggttcgctggatttatctgttattgcgcaattgcctgataacgag
gttattacacagctttcacgtcttgacggcgtaggggtttggacagcggaaatgctgttg
atctcctcattgtcacggccagatattgtcagttggggagatttagccatccgccgcggc
atgatgaatttatatcgccataaaaccctgccccgtgagcgtttcgagcgctatcgccgc
cgatataccccatacggaacaactgcctctctttatttatgggcgttgtcacacaaaacg
ctggaggattga
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