Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1389
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Entry
YPDSF_1389 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YPDSF_1389
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ypp01001
]
YPDSF_1389
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypp03009
]
YPDSF_1389
Enzymes [BR:
ypp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
YPDSF_1389
Protein kinases [BR:
ypp01001
]
Serine/threonine kinases: Other
RIO family [OT]
YPDSF_1389
Ribosome biogenesis [BR:
ypp03009
]
Eukaryotic type
Pre-40S particles
Kinases
YPDSF_1389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
TCAD9
Kdo
YrbL-PhoP_reg
Pkinase
Pup
Motif
Other DBs
NCBI-ProteinID:
ABP39778
LinkDB
All DBs
Position
1554726..1555577
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AA seq
283 aa
AA seq
DB search
MKIPKRIQPLVDDGLVDEVIRRLKSGKEADVHVVRCGSDIRCAKVYKEAENRSFKQAVQY
QEGRKVRNSRDARAMAKGSKFGRKQQEETWQTAEVDALFLLANAGVRVPQPYTCLDGVLL
MELVTDEDGLAAPRLSDVPLSKEQALADHEIMIQYVVRMLCAGLVHGDLSEFNVLMDKDG
PVIIDLPQAVNAAANNHAKAMLERDVANMTHYYGQYAPELLNRKYAKEMWALYEDGKLHP
DTPLTGNFAESTQAADVDAVLDEIKAVIAEEQERLREAQEHNN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattccaaaacgaatccaaccgctggttgatgacggcttggttgacgaagtcatc
cgtcgtttgaaaagtggcaaagaagctgatgtgcatgttgtccgttgcgggtcagacata
cgctgcgctaaagtttataaagaagcagagaaccgcagtttcaaacaagcggttcaatat
caagaagggcgtaaggtccgtaatagccgtgatgcccgggcaatggctaaaggctctaaa
tttggccgcaaacagcaagaggaaacctggcaaactgccgaggtggatgcgttgttcctg
ttagctaatgccggagtgcgcgttccacagccttacacctgtcttgatggcgttttactg
atggaactggtcactgatgaagatggcctcgcggcacccagactcagtgacgtgccgtta
tctaaagagcaggccttggctgaccatgaaatcatgatccaatacgtggtgcggatgtta
tgcgcaggtctggtacacggtgatctttcagaatttaatgtgttaatggataaagatggc
ccggttattatcgatctgccgcaggcggttaatgcggccgccaataaccatgctaaagcc
atgcttgagcgggatgttgccaatatgacccactattatggtcaatatgcccccgagtta
ctgaatcgcaagtatgccaaggaaatgtgggcgctttatgaagacggtaaacttcatcca
gatacgcctctcaccgggaactttgcagaaagcactcaggcagcggatgtcgacgctgta
ttagatgaaattaaagctgttattgccgaagagcaagaacgtctgcgcgaggctcaagag
cacaacaactaa
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