Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1567
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Entry
YPDSF_1567 CDS
T00505
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPDSF_1567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_1567
Enzymes [BR:
ypp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YPDSF_1567
DNA repair and recombination proteins [BR:
ypp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPDSF_1567
Prokaryotic type
YPDSF_1567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABP39954
UniProt:
A4TKZ2
LinkDB
All DBs
Position
1764340..1765026
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AA seq
228 aa
AA seq
DB search
MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVL
LLNTVLTVEAGKAHSHANLGWETFTDKVIAALNEHREGVIFMLWGSHAQKKGRIINTERH
YILKAPHPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQPKLPAVE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctcccttacttggcacgatgtaatcggccaagaaaaagaacaaccgtatttt
aaagatacgctggcctatgtggcagcagaacgccgtgcgggtaagaccatctatccacca
caaaaagatatatttaacgcttttcgcctgaccgaactggatcaagtaaaagtcgtcatt
ctggggcaagatccgtatcacggccccaaccaggctcatggattatcattttcggttcta
cctggtgttcctgcccccccttcattggggaatatatacaaggaactggtcactgatatt
ccaggattccagcgccctaaccacggttttttacaaagctgggccgagcaaggcgtttta
ttacttaatacggtcctgacggtagaagcgggcaaagcccactctcatgctaaccttggt
tgggaaacctttacggataaagtgattgctgcgttgaatgaacaccgagaaggtgtgatt
tttatgttgtggggatcacatgctcagaaaaaaggccgcattattaatactgagcgccat
tatattttgaaagcacctcatccatcacccttgtcagcacaccgtggttttctgggctgt
aagcacttttcgcaagctaatcaattactgcaacaacaaaatcagcagcctattgattgg
caacctaagctgccagcggtggagtaa
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