Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1697
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Entry
YPDSF_1697 CDS
T00505
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YPDSF_1697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_1697
Enzymes [BR:
ypp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
YPDSF_1697
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YPDSF_1697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABP40082
LinkDB
All DBs
Position
complement(1905598..1908969)
Genome browser
AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
VFPLPATFIWDMFTRVLPDIPKESAFSKEAMTWKLMWLLPDLLENPLFSPMKRYLSDDGD
RRKIHQLAARVADLFDQYLVYRPEWLESWERGQLIEGLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIHQLLKSDVCPQGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYTFLAKLQSRKRRHYRESIELSLFRHPQQAEQLFNTDGEQNLSNPLL
ASWGRLGRDHMYLLSQIDEIQEVHAFVDIEPDNLLHGIQHDMLELEDHAVIGTTPETLAR
SDQKRRLDLDDRSLSFHVCHSPQREVEVLQDHLLGLLAADPELTPRDIIVMVVDIDSYTP
YIQAAFGNAPSERYLPFAISDRKASQAHPALHAFITLLDLPQSRFTAEQVLALLEVPALA
TKFGITEDGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWRFGLTRMLLGYAMDST
AGDWQGILPYDESSGLAAELAGQLADMLMHLSQWRQQLGQPRELSEWLPICRQLLDTFFD
QDNDTEAALVLIEQQWQKVIGYGIAAQYPDVVPLNLLRDELAARLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPQGFDLMAKKVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYVAQSYHLPGDEKLSADDSAQRVTQHL
LCWHARMPFSAENFIKNSELQSYAAEWLPSAESKGHAHPNFNQPLQAEPLAEITLDELVR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLSRYQFNTQLLNALINEDDINSVFA
RARAAGVLPYGSFGELYWESQQDEMVPLAEQIRSERKENHSIELNIEFADITVTGWIHQV
QDDGLVRWRPSILTAVDGLLLWLEHLVYCSAGGEGESRIYGRKGTAWRYAPMAADEARPY
LQQLIKGYQQGLCEPLMLLSKSGWAWLSQCFDRESGQILWDEETQGKARMKLLQVWQGDQ
RVTGEGEDHYIQRVCRRMDNQHLDIILHETERYLLPIARHNKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaactggatttactcaaagcgctcaccactgcgctg
atagaaagagaaccgttggataatcctttccagcaagaagtggtgttagtacaaagcccc
ggcatggcccaatggttacaaatgcaactggctcaacagttcagtattgctgccaatata
gtgtttcctctacccgctacttttatctgggatatgtttacccgcgttctgcctgatatt
cctaaagaaagtgcattcagcaaagaggctatgacatggaaacttatgtggctactgcca
gatttattggagaatccactattttctcccatgaagcgctatttaagtgatgatggggat
cggcgtaaaattcaccaactcgcggcacgggtagccgatctttttgaccaatatctggtg
tatcgtccggaatggctggaaagttgggaacgtgggcaattgattgaggggcttgatgat
gcacagcaatggcaagcattactgtgggttgaactgacccgctatactcgccaattggaa
caaccggaatggcaccgggcaaacctctatcagcgttttatccaccaactactcaagtcg
gacgtttgcccgcaagggttaccgaaacgggtatttatatgtggtatatcggcgttgcca
cctatctatttacaggccctacaagcattaggtaaacacattgatatccatttgatgttt
actaacccctgccgttacttctggggagatattcaggattacactttcctcgctaaatta
caaagccgtaaacgtcggcattaccgtgaatcgattgaactaagtctgtttcgccacccg
cagcaggcagagcaactatttaataccgatggtgagcagaacctcagtaacccactcttg
gcctcatgggggcgattagggagggatcacatgtatttgctctctcaaattgatgaaatt
caagaggttcatgcttttgtcgatatcgagccagataatcttttgcatggcattcaacac
gatatgctggagttggaagatcacgcggttattggcacaaccccagaaaccttagcgcgt
agtgatcaaaaacgccgattagatctggatgatcgttcacttagtttccatgtctgccac
agcccacaacgagaagttgaggtgctgcaagatcatttacttgggctattagccgcagac
cctgaattgaccccgcgcgacatcattgtgatggtggtggatatcgacagttatacaccg
tatattcaagctgcgtttggtaatgctccgtctgagcgttatctgccgtttgcgatttct
gatcgcaaagccagtcaggctcatcctgcgttgcacgcctttattaccctacttgattta
ccccagagtcgctttacggctgaacaagtcttagcactgttggaagtccctgctttggcg
accaaatttggtatcactgaagatggtttacggcgcctgcgacaatgggttggtgagtca
ggcatccgttggggattggatgatgataatgtgcgggagctatccttacctgctacgggt
caacacacctggcgttttggtttgacccgcatgctactgggttatgcgatggacagtacc
gcaggggattggcaaggtattctgccttacgatgaatccagcgggctggcagcggaactc
gccgggcagttggccgatatgctgatgcacctgagtcaatggcggcaacaattaggtcag
ccccgagaacttagtgaatggttaccaatatgtcgtcaattattggatacgttcttcgat
caagacaatgacactgaggccgctctggtgctgattgaacaacagtggcagaaagtgatc
ggctacggtattgcagcccaatatccagacgttgtgccacttaatctgctacgagacgaa
ttggcggcacgtttagataatgaacgtattagccaacgttttctcgccgggcctatcaat
ttctgtaccttaatgccaatgcgctccatcccatttaaagtggtttgtctattgggcatg
aatgatggggtatacccgagaacattgcccccccagggatttgatctaatggccaagaag
gttcgtcggggtgaccgtagccgccgcgacgatgatcgctatttgttcctagaggctctg
ctatctgctcagcaacagctttatatcagctacattgggcgttctattcaagacaacagt
aagcgttatccttccgtgctggtaagcgagttaattgaatatgtcgcacaaagctatcat
ttaccgggcgatgaaaaactcagtgctgatgacagtgcacaacgggtgacgcagcactta
ttatgttggcatgcccgtatgccattctccgctgaaaattttattaaaaatagcgaatta
cagagctatgccgctgaatggctgccttctgccgagtcgaaggggcatgcacacccaaat
tttaaccaaccgctacaggctgagccgctggctgaaattacactggatgaattagtgcgt
ttttaccgccatccagtgagagcatttttccaactgcggctaggggttaattttgttatt
gaagaaacagaattacctgacgaagagccatttactttggataaccttagccgttatcaa
tttaatacccagctacttaatgcgctgataaatgaggacgatattaatagcgtctttgcc
agagccagagctgccggcgtactgccatatggatcttttggtgaactttattgggagagt
caacaagatgagatggtacccttggctgaacaaatccgcagtgaacgtaaagagaatcac
agtattgaactcaacattgaattcgctgacatcacggttacgggatggattcatcaggtt
caggacgatggtttggtccgttggcggccatcaatattaaccgccgtcgatggcctttta
ttgtggcttgaacatctcgtgtactgttcggcgggtggtgagggagaaagccggatatat
ggacgaaaagggactgcctggcgttatgcccctatggcggctgatgaagcccggccctat
ttacaacaactcattaaaggttatcaacaaggtttatgtgagccattgatgctcttgagt
aaaagtggatgggcgtggttgagccaatgctttgatcgtgagtcaggccaaattttgtgg
gacgaagagacgcaaggtaaagcacggatgaaacttttacaggtttggcaaggtgatcag
agagtgacaggcgaaggtgaagaccactatatacaaagggtttgcagacgaatggacaac
caacatttggacataattttacatgaaactgaacgttatttgttaccgatagctcgccat
aataaggcgtga
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