Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1995
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Entry
YPDSF_1995 CDS
T00505
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_1995
Enzymes [BR:
ypp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
YPDSF_1995
Transfer RNA biogenesis [BR:
ypp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YPDSF_1995
Prokaryotic type
YPDSF_1995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
ABP40376
LinkDB
All DBs
Position
complement(2252141..2253022)
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AA seq
293 aa
AA seq
DB search
MSGFELDQEETLVQQNTLAQQEKPAEVAGLKIALGIEYNGSRYFGWQRQQEVASVQACLE
AALSKVANEPIGVFCAGRTDAGVHATGQVVHFVTSAVRKDAAWTMGVNSHLPADIAVRWV
KTVDNDFHARFSATARRYRYIIFSHRYRPAILAQGVTHCYMPLDAEKMERAAQCLLGEND
FTSFRAVQCQSRTPWRNVKHVKVTRHGAYIVVDIKANAFVHHMVRNIVGSLIEIGCGNQD
VTWMAELLALKDRTRAAATAKADGLYLVSVDYPDHFALPKVPMGPLFLADDEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggtttgaattagatcaggaagaaacattagttcagcaaaacacattggctcag
caagaaaaaccggcagaagtggccggtttgaaaattgcgttgggtattgagtataacggt
agccgctattttggttggcaacggcagcaagaggttgccagcgtgcaggcctgtcttgag
gcggcattatccaaagtggctaatgaacccattggggtcttctgcgctggccgtaccgat
gcaggggtccatgctaccgggcaagttgtgcactttgttacctctgcagtacgtaaagac
gccgcctggactatgggggtcaacagccatttgcccgcggatatcgcagtgcgttgggtc
aaaaccgtcgataacgattttcatgcccgctttagcgcaacggcccgccgctatcgctat
atcatttttagccaccgctatcgccctgcgatattggcgcaaggggtcacccattgctat
atgccattggatgcagaaaaaatggaacgcgccgcgcaatgtttactcggcgaaaatgat
tttacctctttccgtgccgtacaatgtcaatcccgcacgccatggagaaatgtaaaacat
gtcaaagttacccgacatggcgcgtatatcgtggtagatatcaaggccaacgcgtttgta
catcatatggtgcgcaatatcgttgggagcctgatagaaattggttgtggcaatcaggac
gtgacctggatggcagaattgttggcgttgaaggacagaacacgtgctgccgcaaccgcc
aaagccgatgggttgtatttagtgtctgtcgattacccggaccacttcgcgttacccaaa
gttcctatggggcctttgtttttggcggatgacgagggttaa
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