Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2004
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Entry
YPDSF_2004 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_2004
Enzymes [BR:
ypp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
YPDSF_2004
Transfer RNA biogenesis [BR:
ypp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
YPDSF_2004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
FAD_binding_2
NAD_binding_8
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
ABP40385
UniProt:
A4TM73
LinkDB
All DBs
Position
2262784..2264853
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AA seq
689 aa
AA seq
DB search
MNQRPIQTATLSWNEQGTPVSEQFGDIYFSNEDGLEETHHVFLKGNGFPARFASHPQQSC
IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPEL
ASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF
APAKNPDMWNEQLFNAMARMTRPGGTFSTFTAAGFVRRGLQQAGFNVTKVKGFGQKREML
TGTLPQQIHAPTAPWYHRPAATRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA
QGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLEQGIAFDHQWCGVSQLAFD
DKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMM
LAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPL
SAVRGQVSHIPTTPVLSQLQQVLCYDGYLTPVNPANQHHCIGASYQRGDIATDFRLTEQQ
ENRERLLRCLPQVSWPQQVDVSDNQARCGVRCAIRDHLPMVGAVPDYAATLAQYQDLSRR
IQHGGESEVNDIAVAPVWPELFMVGGLGSRGLCSAPLVAEILAAQMFGEPLPLDAKTLAA
LNPNRFWIRKLLKGRPVQTRSPATQESSR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaacgcccaatccaaaccgcaacactcagctggaatgaacagggtacacctgta
tctgaacagtttggtgacatctatttttccaatgaagatggtctggaagagactcaccac
gtttttctcaaagggaatgggtttcctgcacgcttcgcttcccacccgcagcaaagctgt
atttttgctgaaacgggttttggcactggtttaaacttcctgacattatggcgtgatttt
gccctatttaggcagcaatcgcccaatgctacgcttcggcggttgcactacattagtttt
gaaaaatatccacttcacgtcgccgatctagcctcagcccatgcccgttggccggagtta
gcctctttcgctgaacaactgcgagcgcagtggcccctaccgctggccggttgtcatcgt
attttgctggctgacggcgctattacgttggatttatggtttggtgatgtcaatacccta
ttacccacattggacgatagcctgaataatcaggtagatgcctggttccttgatggcttt
gctcccgccaagaatccagatatgtggaatgagcagttgttcaatgccatggcgcgaatg
accaggccgggaggcactttttcaacctttaccgccgccggatttgtgcgtcgtggtttg
cagcaggcagggtttaacgtaaccaaagtgaaaggtttcgggcaaaaacgggaaatgctg
acgggcaccctgccacaacagattcatgcgcccacggccccttggtatcatcggcctgcc
gccacgcgctgtgatgatattgccattatcggtggcgggattgtcagcgccttgaccgca
ctggccttacaacgtcgcggggcggtggtcacgctctactgtgctgacgcacagccagca
cagggggcatcaggcaaccgacaaggggcactctacccgttgctcaatggtaaaaatgat
gcactggaaaccttttttaccagtgcctttacctttgcccgccgtcagtacgaccaactg
cttgagcaagggatcgcctttgaccatcagtggtgcggtgtcagccaattagcgtttgat
gataagagccgtggcaaaattgagaagatgctgcatacacagtggccagttgagtttgcc
gaagcgatgagccgtgagcaactcagtgagttggccgggctggattgcgcccatgatggc
atacactatcctgctggcggttggctctgcccttctgacctcactcacgcactgatgatg
ctagcgcaacaaaatggcatgacctgccactaccaacatgaactgcagcgattaaaacgc
attgatagccaatggcaactgacctttggtcaatcacaagcggctaaacatcatgccacc
gtcattttagcaactggccaccgcttacctgaatgggaacaaactcaccatctgcccttg
tctgcggtacgtgggcaggtgtcacacatcccgaccaccccggtgctcagccaactgcaa
caggtgttgtgctatgacggttacctgacgccagtcaacccagccaatcagcatcattgt
attggtgccagttatcagcgcggcgacatcgcgactgattttcgcctaaccgagcagcag
gagaaccgtgagcgtttgctacgctgtctgccacaagtcagttggccgcagcaggtagat
gtcagcgataatcaggctcggtgtggcgttcgctgcgctatccgcgaccatttaccgatg
gtcggtgccgtgccggattatgctgcaacactggctcaatatcaggatctgtctcgtcgt
attcagcatgggggtgagagcgaggtaaatgatatcgctgtcgcgccagtctggcctgag
ttatttatggtcggggggttaggctcgcgtggcttatgcagtgcaccattggtggccgag
attctggccgcgcagatgttcggtgaaccattgccgttagatgccaaaacgctggcagca
ttgaatcctaaccgtttttggatcagaaaattattgaaaggcaggccggtacaaactcgc
tccccggccacccaagagtcatcaagatga
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