Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2251
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Entry
YPDSF_2251 CDS
T00505
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00260
Glycine, serine and threonine metabolism
ypp00460
Cyanoamino acid metabolism
ypp00630
Glyoxylate and dicarboxylate metabolism
ypp00670
One carbon pool by folate
ypp00680
Methane metabolism
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01120
Microbial metabolism in diverse environments
ypp01200
Carbon metabolism
ypp01230
Biosynthesis of amino acids
ypp01240
Biosynthesis of cofactors
ypp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YPDSF_2251
09102 Energy metabolism
00680 Methane metabolism
YPDSF_2251
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPDSF_2251
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YPDSF_2251
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YPDSF_2251
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
YPDSF_2251
Enzymes [BR:
ypp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YPDSF_2251
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABP40626
UniProt:
A4TMW4
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All DBs
Position
complement(2548664..2549917)
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANVAVYSALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYEDLARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIDAWFFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVA
VFLERGYKVVSGGTDNHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERVKQKVLAICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattacgatgcagatctgtggcgtgcaatggag
caagaagtcgtgcgtcaggaagaacacatcgaactgattgcgtctgagaactacaccagc
ccgcgtgttatgcaagcgcagggatctcagttaacgaacaaatatgctgaaggctatcca
ggcaagcgttattacggtggctgtgaatatgttgatgttgttgaacaattggcaatcgat
cgcgctaaagcattatttggtgctgattacgcaaacgttcaacctcattctggttcgcaa
gctaacgttgctgtttactccgcgctgctgaaacccggtgacaccgtattggggatgaat
ctggcacacggcggtcacttgacgcatggttcaccagtgaacttctccggcaaactctac
aacatcgtcccttatggtattgatgagtcgggtcaaattgattatgaagatctggcacgt
caggcagaaatacataaacccaaaatgattatcggtggcttctccgcctattctggtatc
gttgattgggcaaaaatgcgtgaaattgccgacagcattgacgcatggttctttgttgat
atggctcatgttgctggtctggttgctgcgggggtttatcctaacccggttccacatgcc
cacatcgttaccaccacgacgcacaagactctggctggcccacgtggcggtttgattctg
gcgaaagggggcgatgaagacttgtacaaaaaactgaactcttctgttttccctggtaac
cagggtggcccattgatgcatgttatcgcaggtaaagcggtcgcgctgaaagaagcaatg
gaacctgagtttaaaatttaccaacagcaagtggctaaaaatgcgaaagccatggtggcg
gtgttcttggagcgcggttacaaagtggtttctggtggtacggataaccacctgttcttg
ctagatttggtggataaagacatcaccggtaaagacgctgatgcggctttaggccgtgcg
aatatcaccgtgaacaaaaacagcgtacctaacgatccgaagagcccgtttgtgacatct
ggtgtgcgtattggtagcccagcgatcacccgccgtggcttcaaagaagcggaatcccgt
gaattggctggctggatgtgtgatgtgttagataacatcaacgatgaagcgaccattgag
cgtgtgaaacagaaagttctggctatctgcgctcgtttaccggtttacgcataa
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