Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2288
Help
Entry
YPDSF_2288 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypp01002
]
YPDSF_2288
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
YPDSF_2288
Peptidases and inhibitors [BR:
ypp01002
]
Cysteine peptidases
Family C82
YPDSF_2288
Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
YPDSF_2288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABP40663
LinkDB
All DBs
Position
complement(2598285..2600141)
Genome browser
AA seq
618 aa
AA seq
DB search
MSMIKRKLQRALVLYCALVCSLMTVFTASAAAPVMPVDSSSALPARGATMSVAQSRSQLL
AALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGIQPQFMQWVKWL
SEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVN
EGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREIL
DRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDD
AAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATL
LALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNN
VVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPN
NFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDL
ANMLLQDAGWNDALVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYD
KMVRSGAQISQQAEFLLQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgataaaaagaaagttacaacgcgcactcgttttatactgcgctttagtttgc
agcctgatgaccgtgtttactgcatcagccgctgctcccgtaatgcccgtggattcatct
tcagctttgccagcacgtggtgcaaccatgtccgtggctcaaagtcgttcgcaattattg
gccgcgcttccaaaagatgtcgtgccactctatgccgcggaattagcgtcattatatgcg
gcgaaccaaatgcagcctatgtggcaagaccgggttgctgttcaacgttttcagcaacag
ttagcggaggttgggctttcaggcattcaaccgcagtttatgcaatgggttaaatggttg
agcgagccagaaatcaccggtatggcgcgtgatattattctatcggatgcgatgctgggt
tatttacactttatttccggtgtcggtgctaatggcagtgtttggttatacagtaatgtg
ccttacaaaatggccatgccgcctgcagcagttttaaacgcctggcagaaagcggtcaat
gaaggctcgacagcctcttatctggcgtcgttggctccgcagcatccgcaatacgataaa
atgcaacaggcgttgaagttgatgctagcagaccgacgcccgtggccacagatgcctact
gggccaagtttacggccggggcaacttagcgacgatatccctgcattgcgggaaatcctt
gaccgaacgggtatgttgcacccaacaacccccgtgaaagcgccagaggtgatccctgtg
gagaaccctacggtggccgtcgttaatgacgatctctctgttgatgaagaaaaaaatcgg
actcagaccaacagcttggtggtcagcccatcagccgtctctgtccctgagagcgatgat
gcggcacccgcaccgatgcctcccgtgagcgtggtcacgttaactgacaatatctatact
cctgagttggtagaagccgttaaacgcttccagcaatggcaggggctcactgatgacggt
gttatcggcccccgtacccgcgaatggttgaatgtctcgccacaaacgcgggccacgtta
ttggcattgaatatccagcgattacgtattttgccggggcatgttgataacgggattatg
gttaatatcccaaattattctctgaattattataaagatggggccgaagtgctttcatct
cgggtgattgttggccgtccaagtcgtaaaacgcccctgatgagtagtgcgttgaataat
gtggtggtgaacccgccgtggaacgtgccgacctcattggtacggcaggatatcgtgccc
aaagcacgtaacgatgccgggtattttcagcgtaatggctataccgtgttgtccggatgg
agtaatgatgctgaagtgatcaatccttcaatgattgactggagtattatctcgccgaat
aacttcccttaccgtttgcgtcaggcaccaggtgctaataactcgttagggcggttcaaa
tttaacatgccaagttctgatgctatctatttacatgacacgccgaatcatggcctgttc
caaaaggacattcgcgccctgagttcaggttgtgtccgtgtcaataaagcgtctgattta
gcgaacatgctgctgcaagatgctggctggaatgatgcactggtctcttccaaggtaaaa
caaggtgataccacctacgtcaatatccgccagcgcgttccggtgcaattgtattatctg
acagcatgggttgcggaagacggtaaaccgcagtttagaacagatatttacaattatgat
aaaatggtgcgatctggtgcacaaatctcacagcaggctgagtttttattgcaataa
DBGET
integrated database retrieval system
