Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2316
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Entry
YPDSF_2316 CDS
T00505
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YPDSF_2316
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypp01007
]
YPDSF_2316
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_2316
Enzymes [BR:
ypp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
YPDSF_2316
Amino acid related enzymes [BR:
ypp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
YPDSF_2316
Transfer RNA biogenesis [BR:
ypp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YPDSF_2316
Prokaryotic type
YPDSF_2316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC113_CCDC96_CC
DUF7568
Motif
Other DBs
NCBI-ProteinID:
ABP40691
UniProt:
A4TN29
LinkDB
All DBs
Position
complement(2640061..2641353)
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AA seq
430 aa
AA seq
DB search
MLDPNMLRNELDAVAEKLARRGFKLDVEVLRQQEERRKVLQVETESLQAERNSRSKQIGA
AKARGEDIEPLRLEVNALGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKNENDN
IEVSRWGEPRKYDFDVKDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQFM
LDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEESDNSNYALIPTAEV
PLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRPED
SMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISSCS
NMWDFQARRMQARYRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPDVLR
PYMGGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatatgctgcgcaatgagctagacgcagtcgccgaaaaactggctcgc
agaggttttaaacttgatgttgaggtgttgcgccaacaagaagagcgccgcaaagtttta
caggttgaaacagaaagtctgcaggcagaacgtaactcccgatcgaaacagatcggtgca
gcaaaggcgcgtggcgaagatatcgaaccattacgtctggaagtgaatgctctgggtgaa
aaactggatgccgctaaagctgagttggataagttacaaaacgaaatccgcgatttagcg
ctgtctatccctaatctgccagatgattcagtaccggtaggtaaaaacgagaatgacaat
attgaagtcagtcggtggggcgagcctcgcaaatatgacttcgacgtaaaagatcatgtt
tctctgggcgaaatggccggtggccttgattttgctgccgctgtgaaactgaccggcgca
cgctttgtggtgatgaaagggcaaattgcccgtatgcaccgtgctctgtctcagttcatg
ttagacctgcacaccgagaaacacggttatctggaagcttacgtcccttatctggttaat
catgccaccttgtacggtacgggtcagttacccaagtttggtgaagatctattccatact
aaaccgttggcagaagaatcagataacagtaactatgctttgattcctactgctgaagtt
ccgctgaccaacttggtgcgcgatgaaattttggaagaggattctctgccattgaagttg
accgcccatacaccatgcttccgttctgaagcaggttcctatggccgtgatacccgtggt
ttgatccggatgcatcaattcgacaaagttgaaatggtgcagatcactcgtccggaagat
tctatggccgcgctggaagagttgacagggcacgccgagaaagttctgcaattactggag
ttgccataccgcaaggtattgctgtgtacgggtgatatgggctttggctccagcaaaact
tacgatctggaagtatggttgccagcacaggacacttaccgcgaaatatcctcatgttct
aacatgtgggatttccaggcgcgccgtatgcaggcccgttatcgcaacaagaccgacaga
aagacgcgtttagtgcacacgctgaacggctctggtttggcggttgggcgtaccttggta
gcggtgttggaaaactatcaacaggcagatggtcgtatccaggtccctgacgtattacgt
ccatatatgggtggcttggaatatattggttaa
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