Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2645
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Entry
YPDSF_2645 CDS
T00505
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03030
DNA replication
ypp03430
Mismatch repair
ypp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPDSF_2645
03430 Mismatch repair
YPDSF_2645
03440 Homologous recombination
YPDSF_2645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypp03032
]
YPDSF_2645
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_2645
Enzymes [BR:
ypp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YPDSF_2645
DNA replication proteins [BR:
ypp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YPDSF_2645
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YPDSF_2645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABP41011
LinkDB
All DBs
Position
2998212..2999246
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQHDFTEHFSFALDAHTE
WEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKLSGLLHPDILLILRANKLTKA
QENSAWFKALSKNGVFVSCQTPEQAQLPRWVSARAKSLNLNVDDAAIQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLMGKSKRAWHILQQLQQED
SEPVILLRTVQRELLLLLALKRQMEQVPLRALFDQHKIWQNRRPMMTQALQRLSLQQLQQ
AVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatttaccctgaacaacttgtcgcgcagctccatgaggggctacgcgcttgt
tatctattgtgtggcaatgaacccttgttgctacaggaaagtcaggaccacattcgtcgg
gtggcatcgcagcacgatttcactgagcatttcagctttgcgttggacgcgcacaccgaa
tgggagcatatttttagcctttgccaggcactgagtttgttcgccagccgccagacactg
ctgctgagtttcccagacagtgggctgaccgcgccaattagcgagcagttggttaaatta
tctggcctgttacacccagacattttattgatattgcgggcgaataagttgaccaaagcg
caagagaacagcgcctggtttaaagctctcagtaaaaatggggtatttgtcagttgccag
acaccagaacaggcccagcttccccgctgggtgagcgctcgcgccaagagcctcaacttg
aacgtagacgatgccgccattcaattactttgctactgctatgaaggtaacttgctggcc
ttatctcaggcgttagaacggctctcgctgctctaccccgacggtaagttaaccctgcct
aaagtagaacaagccgtcaacgacgctgcgcatttcacaccataccattggcttgatgcc
ttgttgatggggaagagcaagcgggcttggcatattttgcagcaattacagcaagaagac
agtgaacccgttattttactgcgtaccgtacaacgtgaactgctcctgctgttagcgctc
aaacgtcagatggaacaagttccattgcgcgcattattcgatcaacacaaaatttggcag
aaccggcggcccatgatgactcaggcactgcaacggctctcccttcagcaactgcaacag
gcggttcatctgctcacacagatggaaatccggctgaaacaggattatggtcaatcaatc
tggcctgagttagaaacgctatctatgctgatgtgtggaaaaacattacctgagagcttt
tttgatgcccattaa
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