Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2790
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Entry
YPDSF_2790 CDS
T00505
Name
(GenBank) bacterial nucleoid protein HU beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypp03032
]
YPDSF_2790
03036 Chromosome and associated proteins [BR:
ypp03036
]
YPDSF_2790
03400 DNA repair and recombination proteins [BR:
ypp03400
]
YPDSF_2790
DNA replication proteins [BR:
ypp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPDSF_2790
Chromosome and associated proteins [BR:
ypp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YPDSF_2790
DNA repair and recombination proteins [BR:
ypp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YPDSF_2790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ABP41152
LinkDB
All DBs
Position
complement(3162999..3163271)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIITSVTESLKEGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPGFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatagacaaaattgccgcaggtgctgatatttctaaagcggcc
gctgggcgtgcgttagatgcaattattacttctgttactgaatccttgaaagaaggggat
gatgtggctctggttggttttggtacttttgcagtacgtgagcgttctgcacgtactggc
cgtaacccgcagacaggtaaagaaattagtattccagccgctaaagtaccgggttttcgt
gccggtaaaggcctgaaagatgcagtaaactga
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