Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2957
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Entry
YPDSF_2957 CDS
T00505
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPDSF_2957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypp03019
]
YPDSF_2957
Enzymes [BR:
ypp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
YPDSF_2957
Messenger RNA biogenesis [BR:
ypp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
YPDSF_2957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ABP41319
LinkDB
All DBs
Position
complement(3356490..3357965)
Genome browser
AA seq
491 aa
AA seq
DB search
MLIREDKTVRDDKARKDKVPGEDNVARKERRPARAHTGRKGHAVSSSEQRQMAIIPRDQH
NISRRDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLGRKPKDFDITTSATPEQVRKLFR
NCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQAEDSDKNSSQQAQNGMLLRDNIFGSI
EDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGIIRLIGDPETRYREDPVRMLRAVR
FAAKLDMSISPETAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQP
LFPLIARNFTEQHDSPMERILVQVLKNTDHRLHNDQRVNPAFLFAAMLWYPLIEHAQKLT
QESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRDIWLLQLRLSRRQGKRAHKLMEH
PKFRAAYDLLLLRAEVEKNHELQRLAQWWGEFQEATPTQQKSMLNTLGADPAPRRSRPRR
PRKPVPRKEGV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatccgcgaagacaaaacggtccgtgatgacaaggcccgtaaagataaagtgccc
ggtgaagataacgtggcccgcaaagagagaaggcccgccagagcacatactggccgcaag
ggtcacgcggtgtcgtcttcggaacagcgccaaatggcgattattccgcgggatcagcac
aatatctcccgcagagatatcagtgacaatgcactgaaggttctctatcgcctgaataaa
tcaggttacgaagcttatctggtgggcggcggtgtccgcgacctgctgctgggcagaaaa
cccaaagatttcgatatcaccaccagcgccacccctgaacaggtgcgaaaactgttccgt
aactgtcgtttggttggccgccgcttccgtttggctcatgtgatgtttggccctgaaatt
attgaagtagcgactttccgtggccaccacgagcagcaacaagcagaagacagcgataag
aactcctcccagcaggcgcaaaatggcatgttgctgcgtgacaacatctttggctccatc
gaagatgatgctcaacgccgtgatttcaccattaacagcctctactacggtatttctgat
tttgcgctgcgtgactacaccggcggcttacgtgatctgaaagaaggtattattcgtcta
attggcgacccagaaacccgttaccgtgaagatccggtacggatgctgcgtgcggttcgt
tttgccgcaaaactggatatgtcaatcagcccggaaacggcagagcctataccgcgtctg
gcctcactgttgcgcgaaatcccgcccgcccgcctgtttgaggagtcactcaagctgctg
caatccggctacggctataaaacctatttaaaactgtgcgaataccagcttttccagccg
ctattcccactgattgcccgtaattttactgaacagcatgattcgccaatggagcgtatt
ctggttcaggtactgaaaaataccgaccaccgtctgcataatgatcagcgggttaatcct
gccttcttatttgcggcgatgctgtggtatccgctgattgaacatgcgcagaagttaacg
caggaaagcggcttggcctattacgatgcatttgcattggccatgaatgatgtactggac
gaagagtgtcgctcactggcgatccctaaacgtatcacctcactggtacgggatatctgg
ttgttacaactgcgtctgtcacgtcgtcaggggaaacgtgcccataagctgatggaacac
cctaaattccgggcggcttacgatctgttactcctacgggcagaagtggaaaaaaatcac
gagctgcaacgtttggcgcagtggtggggcgaattccaggaagccactcccacgcaacag
aaatccatgctgaatacattaggtgctgatcctgcgccacggcgttcacgtccacgccgc
ccacgcaagccagtaccccgtaaagaaggggtataa
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