Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3001
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Entry
YPDSF_3001 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_3001
Enzymes [BR:
ypp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
YPDSF_3001
Transfer RNA biogenesis [BR:
ypp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YPDSF_3001
Prokaryotic type
YPDSF_3001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABP41361
UniProt:
A4TPZ9
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All DBs
Position
3405968..3407017
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AA seq
349 aa
AA seq
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MDMENLTWLHGKPTASGILKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKLHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLATFELEGCEVLEAVRHKRKL
RIGSLKGNAFTLVLRHITDRQDVEQRLQQIAAQGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSYRLAQQLSTTVLEGDALQLSGRGSWFVAQADEL
AALQQRVTAGELNITAPLPGDSELGTHGEALAFEQACLAEQTELLSLIKRERVEGSRRAV
LLKPQNMISNWWDDVTLELSFWLPAGSFATSVVREIMNQDRADDTDIIE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaaacctgacctggctacacggtaaacctacggcgagcggtattttaaaa
gcgaatccggaagattttgttgtcgtagaggatttaggatttgaaccggatggggaaggt
gagcatctgctggttcgtattcgtaaaaatggctgcaatacccaattcgttgctgattat
ttggcgcgctttgccaaacttcatccgcggttagtgagttatgcggggttaaaagaccgc
catgcggtcaccgaacagtggttttgtttacacttgccaggaaaagaagcgccagatctg
gccacctttgagctggaagggtgtgaagtattggaagcggtgcggcataaaagaaaatta
cgtattggttcactgaaaggcaatgcgtttaccttagtactgcgccatattacggatcgc
caggatgtggaacaacgtttacagcaaatagccgcccagggcgtacccaactattttggt
agccagcggtttggccgtggtggtaataatctggtgcaggcccgtttatgggcgaataat
gaaattcgggtaaaagaacgcagcaaacgtagcttttatctgtctgccagtcgcagcgcg
atgttcaatctgattagcagttaccgcttggcgcaacaactgtcgacgacggtactggag
ggtgatgcattacaattatccgggcgtgggagttggtttgttgctcaagcggatgaatta
gccgcgttgcaacagcgcgttactgcgggtgaactgaatatcaccgcgcctttaccgggg
gacagtgaactgggtacccacggtgaagcattagcctttgaacaggcgtgtttggcagag
caaactgaattactgtcattgattaagcgtgagcgcgttgaaggtagccgccgggcagta
ctgctaaaaccgcagaatatgataagcaactggtgggatgatgtcactcttgagctgagt
ttctggctccctgcggggagctttgcgaccagtgtggtgagggaaataatgaaccaggat
cgggctgatgatacggatattattgagtaa
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