Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3182
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Entry
YPDSF_3182 CDS
T00505
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
YPDSF_3182
Enzymes [BR:
ypp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
YPDSF_3182
Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
YPDSF_3182
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
ABP41540
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All DBs
Position
complement(3621100..3623019)
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AA seq
639 aa
AA seq
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MGKWRYLAIGVCLMTTSGVTFADSLDAQRQRYQQVKLAWDSNQMDTVAQLMPTLRDYPLY
PYLEYRQLTQDLSQVSTAQVKDFLNRHPTLPPAKSLPSRFVNELARREDWRGLLTFSPTA
PKPVAARCNYYYAKWATGEQSVAWEGASEIWLNGQSLPGSCDKLFSVWQQAGHQTPLATL
ARMKLALKEGNASLVSYLLKQLPADYQTMGTALAKLQSDPSSVESFARTVGPTDFTRSAT
TIAFTRLARQDVENARLMIPSLVRLQKMSDSEKLELEEAVAWRLMGNDATYEQAKWRDQV
ALRSHSTSLLERRIRMSLGSGDRQGLATWLARLPAEAQDKDEWRYWRASLLLEQGKKAEG
EAILRSLTKERGFYPMVAAQKLNIPYPIKVQVAAKPDVSLAQRPEIARVRELMYWNMDNQ
ARAEWSYLVASRSKAEQEALARYAFDQKWADLSVQATIVAKLWDHLEERFPMAWTKEFRQ
FTEDKGITPSYAMAIARQESAWNPKAQSPVGATGLMQVMPRTAEHTVKRNNIAGYLNSSQ
LLDPVTNIEIGTYYLEEVYQQFGRNRILSSAAYNAGPSRVNTWLGNSGGQVDAVAFIESI
PFSETRGYVKNVLAYDAFYRHFMNRPAKVLSDAEWQRRY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtggcgatatctggcgattggcgtgtgtctgatgacgacttcaggagtgaca
ttcgccgattctcttgatgctcagcggcagcgctatcagcaagttaaattggcttgggac
agcaatcagatggataccgtggcacaactgatgccaacgttacgtgattatcctctgtac
ccttatttggaataccgtcagttgacgcaagatttaagccaggtgagtacggcgcaagtg
aaggattttctgaaccgtcaccccacattaccaccggcgaaatcactgccatctcgtttt
gtgaatgaattggctcgccgcgaagattggcgcgggttgttaacgttcagcccgacagcg
cctaaaccggttgccgcccgttgtaactattactatgccaaatgggccactggtgagcag
tctgtcgcttgggaaggggccagtgaaatctggctcaatggccagtcattaccgggcagt
tgcgataaattattcagtgtctggcaacaagccgggcaccagacaccattggcaacactg
gcgcgtatgaagctcgcgcttaaagagggtaacgccagcctggtgagttacttactcaaa
caactgcccgcagattaccaaaccatgggcactgcactggcaaaattgcaaagtgatccc
agtagtgtagaaagctttgcccgcaccgtcgggccgaccgattttacccgttcagcgaca
acaattgctttcacccgtttggctcgacaggatgtggaaaatgcgcgattgatgatccca
tcattagtacggttacaaaaaatgagtgacagcgagaaacttgagctggaagaggccgtc
gcctggcgtttgatgggtaatgatgcgacttacgaacaagctaaatggcgggatcaagtt
gcgttacgcagccactcaacctcgctactggagcgtcgtatccgtatgtcattgggcagt
ggtgaccggcaggggctggcaacctggctggctcgtctcccggcggaggcgcaagataaa
gatgagtggcgttattggcgtgcatcgttgttgttggaacaaggaaaaaaagcggaaggt
gaggcaatactgcgtagcctgacgaaagaacggggtttctatccgatggtggccgcccaa
aaactgaatattccttacccgattaaggttcaggtggcggccaagccagatgtgtcgctg
gcgcaacggcctgaaatcgcccgggttcgcgagttaatgtattggaatatggataaccaa
gcgcgcgctgaatggagctatttggtggccagtcgcagtaaagctgagcaagaggctctg
gcacgctatgcctttgaccaaaaatgggctgatctgagtgtgcaagccactattgttgcc
aagctttgggatcatctggaggagcgcttcccaatggcatggaccaaagagttccgccag
tttacggaggataaggggatcacgccgagttatgcgatggcgattgcacgtcaggaaagc
gcctggaatccaaaagcacaatcaccggtaggcgcaacgggattaatgcaggtgatgccg
cgtactgcagaacataccgtaaaacggaataatatcgctgggtatctgaatagcagccaa
ctccttgatccggtgactaacattgagataggaacctactatctggaagaggtttatcag
caattcgggcgtaaccgtattttatccagtgcggcttataatgcaggtccgtcacgggtg
aatacttggttgggtaacagtggtgggcaggtggatgcggtggctttcattgaaagtatc
ccattctctgaaacgcgcggctacgtgaagaatgtgttggcttatgacgctttctatcgt
cactttatgaatcgccccgcaaaagtgctgagtgacgccgagtggcagaggcgttattga
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