Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3480
Help
Entry
YPDSF_3480 CDS
T00505
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00521
Streptomycin biosynthesis
ypp00523
Polyketide sugar unit biosynthesis
ypp00525
Acarbose and validamycin biosynthesis
ypp00541
Biosynthesis of various nucleotide sugars
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YPDSF_3480
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
YPDSF_3480
01055 Biosynthesis of vancomycin group antibiotics
YPDSF_3480
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
YPDSF_3480
00525 Acarbose and validamycin biosynthesis
YPDSF_3480
Enzymes [BR:
ypp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
YPDSF_3480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
ABP41833
LinkDB
All DBs
Position
complement(3991314..3992387)
Genome browser
AA seq
357 aa
AA seq
DB search
MALRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQV
DICDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQ
LSVEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTY
GLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQ
VVTEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHD
MRYAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtc
aggcatattattgatggcacctcagatagcgtggtggtagtcgataaactcacctatgcc
ggtaatctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtc
gatatctgtgacagcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtg
atgcatttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatc
gagacgaacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaa
ctgagtgttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtat
ggcgatttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagc
ccatattcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttat
ggtttaccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaa
aagctgatcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggc
aatggtgctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcag
gtggttactgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaag
aatattgaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccg
gcgggtatcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgat
atgcgctatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaa
accttcgaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtgg
cgtcgtgttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
DBGET
integrated database retrieval system
