Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3543
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Entry
YPDSF_3543 CDS
T00505
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_3543
Enzymes [BR:
ypp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YPDSF_3543
Transfer RNA biogenesis [BR:
ypp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YPDSF_3543
Prokaryotic type
YPDSF_3543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
ABP41893
UniProt:
A4TRI1
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All DBs
Position
complement(4074132..4075106)
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AA seq
324 aa
AA seq
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MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNLTQAQIDTALESFRGESQ
QIPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLTAMVEAAQAEGRSPNPELDSL
LLPMDSAVLNFPEVNLLPSVAAYVKQGQPVHVSGAPSEGMVRITEGKERNFIGIGTIAED
GRVAPKRLVVESVEVENLPVENKK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacgtcgtcgcggccgtgacattaacggcgttttgctattggataagccg
ctaggcctctcttctaatgacgttttgcaaaaagtaaaacgtctctttagcgctaatcgc
gctggtcacacgggtgctcttgatccattagcaaccggtatgttgcctatttgtctgggc
gaagcaactaagttttctcaattcttactcgattcagataaacgttaccgagtggttgct
cggctggggcaacgcacggatacctcagatgcggaaggtgcgttaatcagtgagcgtgag
gtcaatcttactcaagctcagatcgatactgcactggagagtttccgcggtgaaagccag
cagatcccctccatgtattctgcattgaaacatcaaggtaagcctctttacgaatatgcc
cgtcaggggattgaagtcgaacgtgaagctcgcagcattacggtttacgagttgctcttc
atccgttgggaaggcaatgatctggaactggaaattcactgttcgaaaggaacgtacatt
cgtaccatcatcgatgacttgggtgaattattgggttgcggcgcacatgtcagttatctg
cgtcgcttgcaggttgcgacttacccgagcgaacggatggtgaccctagagcagttaacg
gcgatggttgaggctgcgcaggcagagggacgctcgccaaatccagaactggattcgctg
ttattgccgatggacagtgccgttcttaattttcctgaagtcaatctgttaccttccgtg
gccgcttatgtaaaacaggggcaaccggtgcatgtgtcaggtgctcccagtgaaggaatg
gtccgaatcactgaaggtaaagagcgtaatttcattggtattggtactatcgcagaagat
ggccgcgttgcccctaaacgtttggttgtggaaagcgtggaagtagaaaatctgccagta
gaaaataaaaagtag
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