Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3615
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Entry
YPDSF_3615 CDS
T00505
Name
(GenBank) succinate dehydrogenase subunit B
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00020
Citrate cycle (TCA cycle)
ypp00190
Oxidative phosphorylation
ypp00620
Pyruvate metabolism
ypp00650
Butanoate metabolism
ypp00720
Other carbon fixation pathways
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01120
Microbial metabolism in diverse environments
ypp01200
Carbon metabolism
ypp02020
Two-component system
Module
ypp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypp_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPDSF_3615
00620 Pyruvate metabolism
YPDSF_3615
00650 Butanoate metabolism
YPDSF_3615
09102 Energy metabolism
00190 Oxidative phosphorylation
YPDSF_3615
00720 Other carbon fixation pathways
YPDSF_3615
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPDSF_3615
Enzymes [BR:
ypp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YPDSF_3615
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_7
Fer4_16
Fer4_18
Fer4
Fer4_2
Fer4_4
Fer2
Fer4_21
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ABP41965
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All DBs
Position
4155681..4156415
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AA seq
244 aa
AA seq
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MTDMKVLKMEVMRYNPERDSEPHFETFEVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNERLPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY
NLDNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKIDSAKDFMIAM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatgaaagtcctgaaaatggaagtcatgcgctataacccggaacgtgatagc
gaacctcactttgaaaccttcgaagtgccttacgatgaacagacgtctctgctggatgca
ctgggttatatcaaagataacctggcaccggatctctcctatcgctggtcttgtcgaatg
gcgatttgtggttcctgcggcatgatggtcaacaaggtgccaaaactcgcctgtaagacc
ttcctgcgggaatatactgcggggatgaaagtcgaagcattgggtaacttcccgattgaa
cgtgatttagtggttgatatgactcactttatcgagagtctggaagccatcaaaccttat
atcattggtaacgaacgcctacccaaggatggcccgaacaagcagacgccagcccagatg
gcgaaataccatcagttctctggctgtatcaactgtggtttgtgctatgccgcctgccca
cagtttggcttaaaccctgagtttattggccccgcagcaatcaccctggcgcatcgttac
aatttggacaaccgtgaccacggtaagaaagagcgtatgcctcagctaaacggtaaaaat
ggtgtctggagctgtaccttcgtcggctactgttctgaagtgtgtccaaaacacgttgat
cccgcggcggctatccagcagggcaagatcgacagtgcgaaagacttcatgatcgccatg
ctgaaaccacaataa
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