Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3655
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Entry
YPDSF_3655 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_3655
Transfer RNA biogenesis [BR:
ypp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
YPDSF_3655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-ProteinID:
ABP42005
LinkDB
All DBs
Position
complement(4199962..4200999)
Genome browser
AA seq
345 aa
AA seq
DB search
MHEAQTFSSTPATKPQYPLQRFSVAPMLDWTDRHCRYFHRLLTKQALLYTEMVTTGAIIH
GKADYLAYSEQDHPVALQLGGSDPQALAHCAKLAEQRGYNEINLNVGCPSDRVQNGRFGA
CLMGEADLVADCIKAMRDAVAIPVTVKTRIGIDQLDSYEFLCEFVQTVAERGECEIFTIH
ARKAWLSGLSPKENREVPPLDYERVYQLKRDFPALTIAINGGVKTLAEAKEHLKHLDGVM
MGREAYQNPGILTQVDRELFDPNAPVVDSVKAIEALYPYIEQELSQGAYLGHITRHILGI
FQGIPGARQWRRHLSENAHKPGAGVSVVEEALALVSPSYYESVGG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagctcagactttttccagtacgccggccaccaagccgcaataccccctgcaa
cgcttctccgtcgcgccgatgctcgattggacggatcgtcattgccgttattttcaccgt
ctgctcactaagcaagctctgttgtataccgaaatggtgaccaccggcgcgattatccac
ggtaaagccgattatctggcttatagcgagcaggaccatccggtcgctttgcaattaggg
ggcagcgatccacaggcattggcgcactgtgccaagctggctgagcaacgcggttataac
gaaatcaatctgaatgtgggttgtccgtcagatcgagtacaaaatggccgctttggtgct
tgtttgatgggggaggccgatctggttgccgattgcattaaagctatgcgtgatgcggta
gctattccggtgacggtaaaaacccgtattgggattgaccaactggatagctatgagttt
ctatgcgaattcgtgcaaaccgtcgcagaacgtggcgaatgcgaaattttcactattcat
gcccgtaaagcctggctctcagggctaagcccgaaagagaatcgtgaagtgccgccactg
gattatgagcgtgtttatcagcttaagcgtgatttccctgcgttgacgattgccattaat
ggtggggtgaaaacattggctgaagctaaagagcacctcaagcaccttgatggcgtgatg
atgggccgtgaagcctatcagaatccgggaattttgacgcaagtagaccgcgagctgttt
gatcctaacgcgccagtggttgatagcgttaaagccattgaggcgctgtatccttatatt
gagcaggaattgtctcaaggggcctatttgggccacataacccgccatattctgggtatt
ttccaaggaatccccggagcgcgccaatggcgtcggcatttaagcgaaaatgcccataag
cccggagcgggggtttctgttgtggaggaggctttagcgctggtatccccttcgtactac
gaatccgtagggggttag
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