Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3819
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Entry
YPDSF_3819 CDS
T00505
Name
(GenBank) transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypp03000
]
YPDSF_3819
Transcription factors [BR:
ypp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
YPDSF_3819
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
MarR_2
TP6A_N
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABP42164
LinkDB
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Position
complement(4388178..4389413)
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AA seq
411 aa
AA seq
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MQKKNDRNSIKIMQIRAFCMTAEQGAASLAALNLFRTQSAITRSIRDLEHTLAISLFERH
AKGMLLTDLGNVILPRARSAMEELTRIPALLRRLQQRDDEGIEDLEPTWLFNERRLQIFL
SLYRQQHALHVAQALDITQSAVSAALKVLEKGAGMYLFHRTPKGMLPTPAGHEIAPCISR
ALNALHHIPEEITAHRGDLTGSVRVGALPLSRARLLPQAMIKLISRHPGIKIVTNESGFT
ALIAELRAGDIDFIIGALRNEKMLLDIHSEILFEEELILLARPNHPLSDRRVKNQELKDI
QWVLPRNHAPSRHLLEVAFCKMGLASPQPVVESGDPAVVRALLLGSDMVAAVSSHQLDFE
VSEGILIPLQVNLTGTRREIGLMTRQKALNSPATDALINCVREVIQSSNDK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagaatgatcgtaactcgataaaaattatgcaaataagagcattttgcatg
acggctgaacagggggcagcttccttagcggcgctcaatttatttcgcactcagtcagcg
attactcgttctattcgtgatcttgaacacactttagccatctcgttatttgaacgccac
gccaagggcatgctgttaaccgatttgggcaacgttattctcccacgagctcgttctgcc
atggaggagttgactcggatcccggcactgttgcgtcggttacaacaacgcgacgatgag
ggtattgaagaccttgaacccacatggttattcaatgaacggcggctacagattttcctc
tcgctctatcgccagcagcacgcgttgcatgtcgctcaggcactggatatcacccagtcg
gcggtaagcgccgcgttgaaggttttggagaagggggcgggtatgtatctgttccatcga
acaccaaaagggatgttgccgacccctgccggtcatgaaattgcgccctgtatcagccgg
gcattgaatgcgctccaccatattccggaagagatcaccgcacatagaggggatttgacc
ggctcggtacgtgttggcgctctgccattaagccgtgcacgcctgctaccacaggcaatg
atcaagctgatttctcgccaccctggcataaaaatagtcactaatgagagtggatttacc
gccctgatagctgaactgcgcgccggtgatatagatttcattatcggtgcactgcgcaat
gagaaaatgcttttagatatccatagcgaaatattatttgaagaagagctgattttattg
gcgcgacccaaccatcccctgtctgatcgcagggtaaaaaaccaagaactaaaagatatt
caatgggttttaccccgaaatcacgccccatcacgccacctgctggaagtcgcattctgc
aaaatgggactcgcatcgccccagccagtagtcgaaagcggtgatcccgccgtggtacgt
gcgctattgcttggttctgatatggtggcggcagtttcctcccatcaacttgattttgaa
gtttcagaagggatcctcataccgctgcaggtcaaccttacaggtacgcgacgcgagata
ggcctgatgactcgccagaaagccttgaattcacccgctaccgatgccctgatcaattgt
gttcgcgaagttattcaatcgagtaacgataaatag
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