Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3903
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Entry
YPDSF_3903 CDS
T00505
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypp03000
]
YPDSF_3903
Transcription factors [BR:
ypp03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
YPDSF_3903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
NirdL-like_HTH
HTH_11
HTH_5
HTH_34
AsnC_trans_reg_3
DUF4080
Fe_dep_repress
DNA_pol_D_N
HTH_IclR
ZW10_C2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABP42244
LinkDB
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Position
4482116..4482577
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AA seq
153 aa
AA seq
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MSEIYQIDNLDRSILKALMENARTPYAELAKNLAVSPGTIHVRVEKMRQAGIITAACVHV
NPKQLGYDVCCFIGIILKSAKDYPSALKKLESLEEVVEAYYTTGHYSIFIKVMCKSIDAL
QQVLINKIQTIDEIQSTETLISLQNPIMRTIVP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatttatcagatcgataatctcgatcgcagcatcctgaaagcattaatggaa
aatgcacgcacaccctatgctgaattagccaaaaacctcgctgttagccccggaactatt
catgtaagagtagaaaagatgcggcaagcagggatcattaccgcagcttgtgtacacgtt
aacccaaaacaactgggttacgacgtttgctgctttattggcataatcttgaaaagtgcc
aaagattacccttccgccttgaaaaaattggaaagcttagaagaagtggttgaggcctat
tacaccactggccactacagcatatttattaaagtgatgtgtaaatccattgatgcattg
cagcaggtacttatcaacaaaatccagactattgatgagatccagtcaaccgagacacta
atatcactgcaaaaccctatcatgcgtacgatcgttccttaa
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