Yersinia pseudotuberculosis ATCC 6904: DJ40_1178
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Entry
DJ40_1178 CDS
T03307
Symbol
rlpA
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypq01011
]
DJ40_1178 (rlpA)
Enzymes [BR:
ypq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DJ40_1178 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ypq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DJ40_1178 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AIN15415
UniProt:
A0ABN5QZN2
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All DBs
Position
1287191..1288273
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AA seq
360 aa
AA seq
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MRKEWLWVGIASVLLSACIDQPPAPQQQVQQTYSGPVEEIGGAEPRYEPFNPNVNQDYKV
NGQSYRIIKDPQNFSQIGLASSYGEEARGNTTATGEIFDPNALTAAHPTLPIPSYVRVTN
VSNGRQIVVRVNDRGPYTPGRVIDLSRAAADRLNISNNTKVKIDFINVAPDGSLSGPGMV
GTTIAKQSYALPSRPDLTSSGMGTPMQQDAPATGAAVQAIDNSQLSGTDATQPVASQSSG
FLRAPTPVPAGVLESSEPVIDSAPVTPPVVANPGPVTTTPTSSAISGGYVVQVGALSDAQ
RAQSWQQSLSQRFGVPGKVSNSGSIYRVQLGPFSHRQQAVDLQQRLSNEAQQQSFIVAAP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggaatggctttgggtcggcatcgcaagtgtgctgctatcagcatgtattgat
cagcctccggccccccagcaacaagtacaacaaacctacagcggcccagttgaagaaatt
ggcggggcagaaccgcgctacgaaccttttaatcctaacgttaatcaggattataaagtt
aatggccagtcctaccgtattatcaaagatccgcagaatttctctcagattgggcttgct
tcttcatatggtgaagaggcgcgtggcaataccacggcaaccggagaaatttttgatccc
aatgccttgaccgccgctcaccctactctgccaatcccaagctatgtccgggtaactaac
gtcagtaatggccgccaaattgtggttcgtgtgaatgatcgcggcccctacacgccgggc
cgtgtgattgatttatccagagcagctgcagatcgcttaaatatttctaacaataccaag
gtgaagatagattttatcaatgtcgcccctgatggctcgctgtctggccctggtatggta
ggcaccaccatcgcgaaacaaagttatgcgttacccagccgcccggacctaacatcaagc
gggatgggtacgccgatgcaacaagatgccccagcaaccggtgccgctgtacaggcgatt
gataacagccagttatcgggtactgatgccacgcaacccgtcgcatcacaaagtagtggt
ttcctaagagcgcccacgccagtccctgcgggtgtgctggaaagctcggagccagtgata
gattcagcgccagtcaccccccctgtggtcgccaatcccggcccggtcactacaacacca
acatccagcgcgatatcaggcggttatgtcgttcaggtcggtgcactgagcgatgctcag
cgagcacagtcttggcaacaaagcctaagccaacgttttggtgttccgggtaaagtgtcc
aacagtggcagcatataccgtgttcagctagggcctttcagtcatcgtcaacaagcggtt
gatctgcaacaacgcctctcaaatgaagcacagcagcaatcctttatcgtggcagcgccc
taa
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