Yersinia pseudotuberculosis ATCC 6904: DJ40_1416
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Entry
DJ40_1416 CDS
T03307
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DJ40_1416 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypq03400
]
DJ40_1416 (xseB)
Enzymes [BR:
ypq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DJ40_1416 (xseB)
DNA repair and recombination proteins [BR:
ypq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DJ40_1416 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AIN14204
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All DBs
Position
1529330..1529584
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AA seq
84 aa
AA seq
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MPKKAASPEIKAASFETSLSELEQIVTRLESGELPLEDALNEFERGVQLARQGQQTLLQA
EQRVQILLSDDVDAPLKPFTPDTE
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaagccgcttcaccagaaatcaaagccgccagctttgaaacatcactcagt
gagctggaacaaattgttactcgcctggaatccggtgagttaccgctggaagatgcgcta
aatgaatttgaacggggtgtacaactggcccgtcaagggcaacaaaccctgttgcaagcc
gaacaacgggtacaaattctcctgagtgacgatgttgacgccccgttgaaaccttttacc
ccagatactgagtag
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