Yersinia pseudotuberculosis ATCC 6904: DJ40_1818
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Entry
DJ40_1818 CDS
T03307
Symbol
lsrB
Name
(GenBank) autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq02010
ABC transporters
ypq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DJ40_1818 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DJ40_1818 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypq02000
]
DJ40_1818 (lsrB)
Transporters [BR:
ypq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
DJ40_1818 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
AIN13999
LinkDB
All DBs
Position
2015935..2016954
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AA seq
339 aa
AA seq
DB search
MRTQRLKKLALVCALGFACITTAQAAERIAFIPKLVGVGFFTSGGKGAVDAGKALGVDVT
YDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWDSDTKP
ECRSVYINQGTPNQLGSMLVDMAANQVKKDQAKVAFFYSSPTVTDQNQWVNEAKKKIQQE
HPGWEIVTTQFGYNDATKSLQTAEGILKAYGDLDAIIAPDANALPAAAQAAENLKRANVA
IVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDIPNIGV
VEVSPNRVQGYDYEAKGNGIVLLPQRVIFTKENISKYDF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagaacacaaagattaaaaaaattagcactggtttgcgctcttggatttgcctgtatc
actaccgcacaagctgcggaacgcatcgcatttatcccgaaactggtcggggtcggtttc
ttcaccagtggcggtaaaggtgccgtcgatgcaggtaaagcattgggggtggatgtcacc
tatgacggcccgaccgaaccgagcgtttccggccaggtccaattgatcaataactttgtt
aatcagggctataacgccatcgtggtgtctgcggtatcaccggatggcctgtgcccagcc
ttgaagcgcgccatgcaacggggcgtcaaaatcctaacctgggactccgataccaaacca
gagtgtcgttcggtgtatatcaaccaaggtacgccaaatcaattgggatcaatgttggtg
gatatggccgccaatcaggtgaaaaaagatcaagccaaagtggcgttcttctattccagc
ccgacggtgaccgatcagaaccagtgggtcaatgaggcgaagaaaaagattcaacaagag
caccccggctgggaaatcgtcactactcagtttggttataacgatgccacaaaatccctg
caaaccgccgagggtattttaaaagcctatggcgatttggatgcgattattgctccggac
gctaacgccctgcctgcggccgcacaagccgccgaaaacctgaagcgcgctaatgttgcc
atcgtcggcttcagtaccccgaacgtgatgcgcccctatgtcgagcgtggcacggtcaaa
gagttcggcctctgggatgtggtgaatcaaggcaaaatctcagtgtatgtcgccaatgag
atgctgaaaaaaggcgatctgaatgtaggggataagattgatatcccgaatattggtgtg
gttgaggtctcccctaaccgtgtgcagggctacgactatgaggcgaaaggcaacggtatc
gttttactgccacagcgcgtcatcttcaccaaagaaaatatcagtaaatacgacttttaa
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