Yersinia pseudotuberculosis ATCC 6904: DJ40_1868
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Entry
DJ40_1868 CDS
T03307
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00230
Purine metabolism
ypq00240
Pyrimidine metabolism
ypq01100
Metabolic pathways
ypq01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
DJ40_1868 (nrdD)
00240 Pyrimidine metabolism
DJ40_1868 (nrdD)
Enzymes [BR:
ypq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
DJ40_1868 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AIN15341
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Position
2068537..2070663
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AA seq
708 aa
AA seq
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MIKRDGCQVPFDEVRIKEAVERAALAVGVVDADYCATVARVVAQTMENQPKVDIREIQNA
VENQLMAGQYKQLARAYIEYRHDRDISRELRGRLNQEIQGLVEQSNKALLNENANKDSKV
IPTQRDLLAGIVAKHYAKQHLLPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDLEGML
TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESFNKHK
AVAEEWQIPDVAGYAMSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWQSR
MIQQAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECATKRMYPD
ILNYDQVVKVTGSFKTPMGCRSFLGVYEEEGQQIHDGRNNLGVISLNLPRIALEAKGDEN
QFWQLLDERLLIAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNIAEIFKNGRA
SISLGYIGIHETINALFGHQTHLFDDQKLREKAIAIVAHLKQATDDWKDETGYAFSLYST
PSENLCDRFCRLDTAEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPLANGG
FICYGEYPNLQHNIRALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGFTCPK
CGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLANGQLG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaacgggacggctgccaggtaccttttgatgaagttcgtatcaaagaggctgtt
gagcgcgcagcattagctgttggcgtggtcgatgccgattattgtgcaaccgttgcccga
gtggtcgctcaaacgatggaaaaccagccgaaggttgatatccgtgaaattcaaaacgcg
gtagaaaaccaactgatggcgggtcaatacaaacagttagcccgggcttacatcgaatat
cgtcatgatcgtgatatctcacgggaactgcgtggccgcttgaatcaggaaattcaaggg
ttagtggagcaaagcaacaaagcactgctgaacgaaaatgccaacaaagacagcaaagtg
atccctacccagcgcgatctgttggccggtattgttgccaagcactacgctaaacagcat
cttttgccccgcgatgtggtgctggcccatgagcgcggcgaaattcactatcatgatctg
gattacgcgccgttcttcccgatgttcaactgtatgttgattgatttggaaggcatgtta
acccaaggttttaaaatgggtaatgcggaaatagagccgccaaaatccatttctaccgca
accgctgtaaccgcacaaattatcgcgcaggttgccagccatatctatggtggcaccacc
attaaccgtattgatgaagttttggccccctttgtcacggaaagctttaataaacataaa
gcggtcgccgaagagtggcagatccctgatgttgcaggttatgccatgtcgcgtaccgaa
aaagagtgttacgacgccttccagtcactggagtatgaggtcaatacactgcataccgcg
aatggccaaacgcccttcgtcaccttcggttttggcttgggcaccagttggcaatcacgc
atgatccagcaggctattttgcgtaatcgtattgcgggcttgggtaaaaaccgtaaaacg
gcggtattcccaaaactggtatttgctatccgcgatggcctgaaccacaaatttggcgat
gctaactacgatatcaaacagttggcgctggagtgcgcaaccaagcgcatgtatccagat
attcttaattatgatcaagtggttaaggtcactggctcctttaaaacgccaatgggctgc
cgtagcttcctcggcgtgtatgaggaggagggtcaacaaatccacgatggccggaataat
ttgggagtgatcagccttaatctgccacgtatcgcgttggaagcaaaaggggatgaaaac
caattttggcagttgctggatgagcgcctgcttatcgcgaaaaaagcgctaatgacccga
attgcccgtttagaagggatcaaagcacgagtcgcccccattctgtatatggaaggtgct
tgcggtgtacgcttacaagcggatgataatattgccgaaatctttaaaaatggccgtgcg
tcgatctcgctgggctatatcgggatacatgaaaccattaatgccttattcggccatcag
acccatctctttgatgaccagaagctgcgcgaaaaagccatcgccattgtggctcatttg
aaacaggctaccgatgattggaaagatgaaaccggttatgcctttagcctatacagcacc
ccaagtgaaaacttgtgtgaccgcttctgccgccttgataccgctgaatttggcgtggtt
gaaggggtgacggacaaaggctattacaccaacagcttccatctggatgttgagaaaaaa
gtgaatccctacgacaaactggatttcgaagccccttatccgccgctggctaacggtggt
ttcatctgttacggcgaataccctaatttgcagcacaacatccgggcgctggaagacgtc
tgggattacagctacagccgggttccttattacggcaccaacacgccaattgatgagtgc
tatgaatgcggcttcaccggtgaattctcttgtaccagcaaaggctttacctgcccgaaa
tgcggcaaccatgagccatcgaaagtgtcggtcacccgccgggtatgtggttatctgggt
agcccagatgcacggccatttaatgcgggtaaacaagaagaagtgaaacgccgggtgaaa
catctggctaacgggcagttgggctga
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