Yersinia pseudotuberculosis ATCC 6904: DJ40_2560
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Entry
DJ40_2560 CDS
T03307
Symbol
pelY
Name
(GenBank) periplasmic pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00040
Pentose and glucuronate interconversions
ypq01100
Metabolic pathways
ypq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DJ40_2560 (pelY)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DJ40_2560 (pelY)
Enzymes [BR:
ypq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DJ40_2560 (pelY)
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AIN14007
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All DBs
Position
2829697..2831415
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AA seq
572 aa
AA seq
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MKKRALLLSMSVLAMLYIPAGQAAEIDRLTVVKQYVDNVLNKASDTYHGDKPSPLLADGV
DPRTGQQMEWIFPDGRRAVLSNFSAQQNLMRVMSGLSELSGDPQYQKRAEDIVRYHFQNY
QDNSGLLYWGGHRFVDLKTLQPEGPSEKEKVHELKNAYPYYDLMFSVDSDATTRFIRGFW
NAHVYDWRILETSRHGEYGKPMGALWESTFEQQPPFFATKGLSFLNAGNDLIYSASLLYK
YQQDQGALVWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPTALEGNMMLKGRTSTLYSENALMQLQLGKDLGGQGDDLLKWTVDGLKAFAKYGY
NEQDNTFRPMIANGQDLSNYTLPRDGYYGKKGSVLKPYKAGNEFLISYARAYAVDNDPLL
WKVARGIASDQGLGDIGSAPGKEMKVKLDTTNSDPYALFALLDLYNASQVAEYRSLAEKV
ADNIIKTRYIDGFFMASPDRQYADVDAIEPYALLALEASLRNKPQAVAPFLNGAGFTEGA
YLMADGSARISTRDNELFLLNVGETLQPNGRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcattattgttgagtatgtcagtgctggcaatgctgtatatccccgcc
gggcaagccgcagagatagaccgtctcaccgtagttaagcagtatgtcgataatgtactg
aacaaagcatcagatacttatcacggtgataaacctagtccattgctggctgatggtgtt
gacccccgaaccgggcagcaaatggagtggatattccctgatggccgtcgtgctgtgcta
tccaacttctctgcacaacaaaatctgatgcgggttatgagtgggctgagtgaacttagc
ggtgatccgcagtaccaaaagcgtgctgaagatatcgtgcgttaccatttccaaaattat
caagataatagcggcttgctctactggggaggccaccgttttgttgatctgaaaaccttg
cagccggaagggccgagcgaaaaagagaaagtccatgagctgaaaaatgcttatccctat
tatgacctgatgttcagtgttgatagcgacgcgaccacccgttttattcgcggtttctgg
aatgctcatgtgtatgattggcggatccttgaaaccagccggcacggtgagtacggtaag
ccaatgggggcattgtgggaaagtacgtttgagcaacaacctcctttctttgcgaccaaa
gggctcagtttccttaacgccggtaatgacctgatctattccgcctccctgctgtataaa
tatcagcaagatcagggcgcattagtgtgggcaaaacgtttggctgatcaatatgtgttg
ccgcgagatgccaagactggcctcggtgtctatcagttcactcaggcactgaaacgtgaa
gagccaacagatgatgcggatacccattccaagtttggcgaccgtgcacagcggcagttc
ggacccgagttcgggccaacggcgcttgaaggcaatatgatgctcaaagggcgcaccagt
accctttattctgaaaacgccttgatgcaactgcaactgggtaaggatttgggggggcaa
ggtgacgatttactgaaatggaccgtggatggcctgaaagctttcgccaaatacggctac
aacgagcaggacaatacgttccgcccgatgatcgctaatggtcaggatttatcgaattac
actctgccacgtgatggttattacggcaaaaaaggatcggtactcaagccttataaggcg
ggtaacgagtttctgatttcctatgcgcgtgcttatgctgtcgataatgaccccttactg
tggaaggtggctcgcggtattgccagcgatcagggattgggcgatatcggcagtgcgcca
ggcaaagagatgaaggtcaaactggataccaccaatagcgatccgtatgcgctgtttgct
ttgctggacctctacaatgccagccaggtcgctgagtaccggtctttggcggagaaagtt
gccgataacatcatcaaaacgcgttatatcgacggtttctttatggcttcaccggatcgg
caatatgccgatgtggatgctatcgagccttatgctttgttggcattggaagcatcattg
cgtaacaaaccacaagcggttgcccctttccttaatggggctggttttaccgaaggtgct
tacctgatggcagacggttcagcccgaatttctacccgtgacaatgagctgttcttgctc
aatgtgggtgagacgttgcagccgaatggccgtaaatag
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