Yersinia pseudotuberculosis ATCC 6904: DJ40_2897
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Entry
DJ40_2897 CDS
T03307
Name
(GenBank) putative isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00541
Biosynthesis of various nucleotide sugars
ypq01100
Metabolic pathways
ypq01250
Biosynthesis of nucleotide sugars
Module
ypq_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DJ40_2897
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypq01005
]
DJ40_2897
Enzymes [BR:
ypq01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
DJ40_2897
Lipopolysaccharide biosynthesis proteins [BR:
ypq01005
]
Lipid A
DJ40_2897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
DUF2529
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AIN15871
LinkDB
All DBs
Position
complement(3225318..3226304)
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AA seq
328 aa
AA seq
DB search
MSTFDLQPGVDFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGKVVVMGMGKS
GHIGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLK
RQKILLICMSSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLK
ARGFTQEDFALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLT
VICDDSMRIKGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESR
HITALLVADGDQLLGVVHMHDMLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttgatttacagccgggcgtggatttccagcaggcaggtaagcaggtactt
cagattgaacgcgaagggctggctcaactcgatcaatacataaacgaggatttctccaga
gcctgtgaggccatttttcgttgccacggcaaagtcgtcgtgatgggaatgggcaaatct
ggtcatattggctgcaaaattgcagccacattcgccagcacgggcacacctgcatttttt
gtccatcctggtgaagccagccatggcgatttgggcatgatcacgccacaagatattgta
ttagctatctctaactctggggaatccaacgaaatcctcacgttgatccccgtgcttaag
cgccagaaaattctgttgatttgcatgagcagtaaccctgagagcaccatgggtaaagcg
gccgatattcacttgtgcattaatgtgccacaagaggcctgtccgctggggctagcgcca
accaccagtacgactgcaacactggttatgggggatgcgttggcggtagccttgctcaaa
gcacggggtttcacgcaggaagatttcgcactctctcacccaggtggcgcgctggggcgt
aagttgctgctgcggatcagcgatattatgcatacgggtacggagatccccaccgtcagc
cctgatgcatcattacgtgatgccttgctagaaattactcggaaaagtctgggtttgacc
gttatttgtgacgattcaatgaggattaaaggtatctttaccgacggtgacttgcgccgg
gtatttgatatgggcattgatctgaataatgcaaaaattgctgacgtcatgactcgcggg
ggtattcgagtccctccgaacatattggcggtggacgcgctcaatctgatggagtcacgc
catatcactgcgttactcgtcgctgatggtgaccaattactgggtgtcgtacatatgcac
gatatgctgagagccggtgttgtctga
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