Yersinia pseudotuberculosis ATCC 6904: DJ40_3278
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Entry
DJ40_3278 CDS
T03307
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00330
Arginine and proline metabolism
ypq00480
Glutathione metabolism
ypq01100
Metabolic pathways
ypq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DJ40_3278
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DJ40_3278
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DJ40_3278
Enzymes [BR:
ypq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DJ40_3278
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIN14173
LinkDB
All DBs
Position
3693645..3695807
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AA seq
720 aa
AA seq
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MTLLKIATSARLASYVETQRGVVYLNQTDFTDVAAVVMSVEDANAGILSMLHDLGFAIPA
FIAVTAEQTVSADYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MNNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNEDYLRQQLREVAPERAKEARPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIETRKSLLVRCSMLRPFIPPVVGGKNWQDYATDVIANDARFFNFVPDERWHG
FEGYNQDQYLVDPCKLLLTTPGIDASTGRYTSFGIPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENTAKMAHLVDMLVQFERYVEQDAKLCDVLPTIYRKNEERYHGYTLRQLCQEMH
DLYVSHDVKQLQKDMFRKASFPRVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVSWRRIFGYVITQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacactattaaaaatagcaacaagcgcccgcctggcttcttatgtagaaactcagcgc
ggagtggtgtacctcaatcagactgattttactgatgttgccgcggtggtaatgtcggtt
gaagatgcaaatgcgggtatattgtcaatgctgcatgaccttggttttgctattcctgcg
tttattgccgtgacggcagaacagacggtctctgctgattatttgcccttgattaaaggt
gtcattacgcttggtgaagcaaataaagctttttataacgctcaggtagaagctgccgcc
agtgaatatcaaaagaatctcttaccgccttttttctcaacactgaaaaaatatgtcgag
atgaataactcgacctttgcttgccctggccatcaggggggcgaattttttcgcaagcat
cctgcaggacgccagttttttgaattctacggtgagacgatttttcgttcagatatgtgt
aatgccgatgtcaaattaggggatttacttatccatgaaggggcggcaaaagatgcacag
aaatatgctgctaaggtattcaatgccgataaaacctattttgtcctgaacgggacctcg
gcggccaacaaggtcgtgaccaacgctctactgacccgtggtgatttagtgttgtttgac
cgcaataaccataaatctaaccatcatggtgcgctgatccaggcgggcgcgacgccggtt
tatctggaaacggctcgtaacccctttggttttattggtggtattgatgcgcactgcttc
aatgaagattatttacgtcaacaactgcgtgaagttgctcccgagcgtgcaaaagaggct
cggccattccgattagcgatcattcaattgggtacctacgacggtacggtatataacgcc
cgccaagtagttgatagcattggtcatttatgcgattacattttgtttgattctgcttgg
gtgggttacgaacaatttattccgatgatgaaggatttctcaccgttattactggaatta
aatgaaaatgatcctgggattattgtgactcaatcggtacacaagcagcaggccggtttt
tctcagacctctcaggtacataaaaaagataatcacattaaaggacagaaacgtcactgt
aaccataagcgttttaataatgcctttatgttgcatgcatcgaccagtccgttttatcca
ttatttgcggcattggatgttaatgccaaaatacactctggtgacagtggccgccgtatg
tggatggattgtgtaaaactcggtattgaaacgcgtaaatcgttattggtacgctgttcg
atgttacggccttttattcctccagttgttggcggtaaaaattggcaagattatgctacg
gatgtgattgccaatgatgcgcgcttctttaattttgttccagatgaacgctggcatgga
tttgagggatataaccaagatcagtatttggttgatccgtgcaaattattgctgacgacg
ccgggaattgatgccagcactggccgatatacttcgtttggtattccggcggctattttg
gcgactttcctgcgtgaaaatgggattgtgccagaaaaatgtgatcttaactcgatccta
ttcctgctgaccccggcagaaaataccgccaaaatggcacacctagtggatatgttggtg
cagtttgaacgctatgttgaacaagatgcgaagctgtgtgatgtattaccgacgatctat
cgtaagaatgaagagcgttatcacggttataccttgcgtcagttatgccaagaaatgcat
gacctgtacgtcagccatgacgttaagcaattgcaaaaggatatgttccgtaaagccagt
ttcccgcgggtagtcatgaacccgcaagacgccaatattcagtttatccgcgataatatt
gagttgattcctattgctgaagctgaaggccgtattgccgccgaaggcgctttgccttat
ccaccgggtgtgctgtgtgtggtgcccggtgaagtgtggggtggggcggttcagcgttat
tttctggcgctggaagaggggattaacttactgccgggcttttcacctgagttacagggc
gtttatatcgaaaaaggtgatgtgtcttggcggcgtatctttggttatgtgattacgcaa
tag
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