Yersinia pseudotuberculosis ATCC 6904: DJ40_3347
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Entry
DJ40_3347 CDS
T03307
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DJ40_3347 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypq01007
]
DJ40_3347 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypq03016
]
DJ40_3347 (lysS)
Enzymes [BR:
ypq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DJ40_3347 (lysS)
Amino acid related enzymes [BR:
ypq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DJ40_3347 (lysS)
Transfer RNA biogenesis [BR:
ypq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DJ40_3347 (lysS)
Prokaryotic type
Other AARSs
DJ40_3347 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AIN15856
LinkDB
All DBs
Position
3781184..3782701
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AA seq
505 aa
AA seq
DB search
MSEQKPQVAEQAQELNSELQARREKLAVLRGKGIAFPNDFRRENLSDQLHAEFDSKENEE
LEALNIDVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDLGD
ILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRT
LTETILGSSVVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGI
KVEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGG
REIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYITALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaaaaccacaagtcgctgagcaagcgcaagaactcaatagtgagttacaa
gcccgtcgagaaaaactggctgtcttacggggaaagggaattgcattccctaatgatttc
cgccgtgagaacctttccgaccagttgcatgccgagtttgacagtaaagagaatgaagag
ttagaagcactgaatatcgacgtaaccgttgctggccgtatgatgacccgccgtatcatg
ggtaaagcatcatttgtgactctgcaagatgttggtggccgtatccagttgtacgtttcc
cgtgatgacctaccggaaggcgtttataacgaagaattcaaaaagtgggacctgggcgat
atcttgggtgcgcgcggtaaactgtttaaaaccaaaaccggtgagctgtcgatccactgt
agcgaactgcgtctgttgaccaaggctctgcgtccattgccagataaattccatggctta
gctgaccaggaaacccgttaccgccagcgttatttggatctgattgctaacgacgagtct
cgtcatactttcaaagtccgttcgcaagtgatgtccggtatccgtagcttcatggttgaa
aaaggcttcatggaagtcgaaacgccaatgatgcaagtgatccctggcggcgcttccgca
cgtccgtttgtcacgcatcacaatgcgttggatatcgatatgtatttgcgtatcgcgcca
gagctgtatctgaaacgtctggtcgtggggggcttcgaacgtgtgttcgaaatcaaccgt
aacttccgcaacgaaggggtttcgccacgtcataacccagagttcaccatgatggaactc
tatatggcttatgcggactataaagacctgatcgtcttgacggaagagctattccgcact
ctgaccgaaaccatattggggagcagtgtggtgcaatatggcgaacagacttttgatttc
ggtaagccttttgccaaattgaccatgaaagaagctatttgtaaatatcgtcctgaaacc
aatgtcgcggatttagacgatatggataaagccgtcgcaattgccgaatcattgggtatc
aaggttgagaagagctggggcctgggtcgtattcaatgtgaaatctttgaagagaccgca
gaaagtcatcttatccagccaacgttcatcacagaatatccagccgaggtttctccgcta
gcacgccgtaatgacgataatccatttatcactgaccgctttgaattcttcatcggtggc
cgtgaaattggtaatggcttctctgagttgaacgatgccgaagaccaggcgcagcgtttc
gccgatcaggtaagtgctaaagaagctggcgatgatgaagcgatgttctacgatgaagac
tatatcactgcattggaacatggcttaccaccaaccgcagggctaggtattggtattgac
cgtatggttatgttgtttaccaatagccataccatccgtgatgtcattttattcccagcg
atgcgcccggtaaaataa
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