Yersinia pseudotuberculosis ATCC 6904: DJ40_3586
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Entry
DJ40_3586 CDS
T03307
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DJ40_3586 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypq03400
]
DJ40_3586 (ung)
Enzymes [BR:
ypq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DJ40_3586 (ung)
DNA repair and recombination proteins [BR:
ypq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DJ40_3586 (ung)
Prokaryotic type
DJ40_3586 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIN16340
LinkDB
All DBs
Position
complement(4037285..4037971)
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AA seq
228 aa
AA seq
DB search
MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVL
LLNTVLTVEAGKAHSHANLGWETFTDRVIAALNEHREGVIFMLWGSHAQKKGRIINTERH
YILKAPHPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQPKLPAVE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctcccttacttggcacgatgtaatcggccaagaaaaagaacaaccgtatttt
aaagatacgctggcctatgtggcagcagaacgccgtgcgggtaagaccatctatccacca
caaaaagatatatttaacgcttttcgcctgaccgaactggatcaagtaaaagtcgtcatt
ctggggcaagatccgtatcacggccccaaccaggctcatggattatcattttcggttcta
cctggtgttcctgcccccccttcattggggaatatatacaaggaactggtcactgatatt
ccaggattccagcgccctaaccacggttttttacaaagctgggccgagcaaggcgtttta
ttacttaatacggtcctgacggtagaagcgggcaaagcccactctcatgctaaccttggc
tgggaaacctttacggatagagtgattgctgcgttgaatgaacaccgagaaggtgtgatt
tttatgttgtggggatcacatgctcagaaaaaaggccgcattattaatactgagcgccat
tatattttgaaagcaccccatccatcacccttgtcagcacaccgtggttttctgggctgt
aagcacttttcgcaagctaatcaattactgcaacaacaaaatcagcagcctattgattgg
caacctaagctgccagcggtggagtaa
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