Yersinia pseudotuberculosis ATCC 6904: DJ40_3900
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Entry
DJ40_3900 CDS
T03307
Symbol
ccmF
Name
(GenBank) cytochrome c-type biogenesis protein CcmF
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypq02000
]
DJ40_3900 (ccmF)
Transporters [BR:
ypq02000
]
Other transporters
Others
DJ40_3900 (ccmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
Motif
Other DBs
NCBI-ProteinID:
AIN13203
LinkDB
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Position
4375751..4377721
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AA seq
656 aa
AA seq
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MIPEIGSFLLCLALAISLLLSLYPQWGAARQDARMMAVGRPLTYGMFAAITLSFICLIYA
FVVNDFTVSYVAANSNSYLPIYYRIAASWGAHEGSLLLWVLLLSCWSLAVALFSRSMPED
AVARVLSVLGMITGGFLLFIILTSNPFSRTLPDFPIDGRDLNPLLQDVGLIFHPPLLYMG
YVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTLGIVLGSAWAYYELGWGGWW
FWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFLVRSGVLV
SVHSFASDPARGMFILAYLVIVIGGSLLLYAVKGAQVRSRTQHEVFSRETFLLGNNVLLI
AAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPMALLMGIGPLVRWRRDEPS
KLWKRLSVALVVTLLLSISVPWLLQDSVAGMTVVGLMMAIWVFILTLMELHERATHRYGF
WRGLTHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKAGDSIDIHDYHFTFRDV
HDIKGPNYTGGVGIIDVTRNGKLEATLHAEKRYYSVARSMMTEAAIDGGLTRDLYAALGE
ELGDGSWAVRLYYKPFVRWIWFGGIFMAVGGIFCMLDPRYRMSKKLKRGAIPEAES
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgaaattggcagttttttattatgtttggcgttggcgatttcactgctgctg
agtctgtatccacaatggggagccgcgcgtcaggatgcccgtatgatggcggttggcagg
ccactgacttatggcatgtttgccgcgatcacgttgtcatttatctgtctgatatatgca
tttgtggtaaatgattttaccgtctcctatgtcgcggcgaattccaactcatatttgccg
atttattaccgtattgccgcgagttggggagcgcacgaaggctccttattattatgggta
ttgctgctcagttgttggtcattggcggtagcgctgtttagccgttcgatgccagaggat
gcggtggcgcgggtgttatccgtgctgggaatgattaccggcggttttctgctatttatt
attctgacgtctaacccgttctctcgcacattacctgattttcctattgatggccgcgat
ctgaacccgctactacaagatgttgggttgattttccatcccccgctgctctacatgggg
tatgtcggtttctccgtcgcgtttgcttttgcaattgcatcattaatggccggtaggctc
gacagtgcctgggcgcgttggtcacgtccatggactcaggccgcatgggttttcctaacg
cttggcatcgtacttggctcagcgtgggcttattatgaattggggtggggcggctggtgg
ttctgggacccggtcgaaaatgcctcctttatgccgtggctggccggtaccgcactgatt
cactcactggctgtcacggagaagcgcggtactttcaaagcgtggacggtattgttggcg
atcaccgcgttctccttgtgtttgatggggacattcttagtccgctcaggcgtgctggtt
tcggtgcactcctttgcctctgatccggcccgtggcatgtttattctggcctatctggtg
attgtgattggcggttccctgctgctgtatgcggtaaaaggcgcgcaggtgcgcagccgg
actcagcatgaagtcttttcccgcgagactttcctgctcggcaacaatgtgttgcttatt
gccgcaatgctcgtggtgttgctgggaacattactgccactggttcacaaacagttggga
ttgggcagtatctccattggtgaaccgttctttaatacgatgttcacttggttaatggtt
ccgatggcattgctcatggggatagggccgctcgtgcgttggcgtcgtgatgaaccgagc
aaactgtggaagcggttgagtgtggctctggtggtcactctgctgttatcgatatccgta
ccgtggctgctgcaagatagtgttgccggtatgacggtcgtcgggttgatgatggccatt
tgggtgttcatcctgacattaatggaattgcacgaacgggccacccatcgttatggcttc
tggcgtgggttgactcacctttcccgtagccactggggcatggtgttggggcatctcggg
gtggcggttacggtaattgggattgcgtttagccagaattacagtgtcgaacgcgatgtg
cgcatgaaggccggtgatagtatcgatatccatgattatcacttcacttttcgcgatgtc
cacgatatcaaagggcctaactataccggcggcgttggcattattgatgtcacccgtaat
ggtaaattggaggccacattacatgcagaaaaacgctattacagtgtcgcccgctcaatg
atgactgaagcagccattgatggggggctgacccgcgatctttatgccgccttgggtgaa
gagctgggcgatggctcatgggcggtccgcttgtattacaaaccttttgtgcgttggata
tggtttggcgggatctttatggccgtcggcggcatcttctgtatgctcgatccgcgctat
cggatgagtaaaaagctaaaacgcggtgcgataccggaggcagagtcatga
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