Yersinia pseudotuberculosis ATCC 6904: DJ40_3974
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Entry
DJ40_3974 CDS
T03307
Symbol
idnR
Name
(GenBank) HTH-type transcriptional regulator idnR
KO
K06146
LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypq03000
]
DJ40_3974 (idnR)
Transcription factors [BR:
ypq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DJ40_3974 (idnR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_IclR
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AIN13777
LinkDB
All DBs
Position
4460384..4461376
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AA seq
330 aa
AA seq
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MKNQRVTLQDIALLAGVTKMTVSRYLRMPEKVAPETGERIAQVMAEVNYSADPESETSLN
QKSPRIGILVPSFNNQIFSDLLAGIESITVANGYQTLVVNYNYNKAREEEQIINLLSCQI
SGLILTDSEHTLRADKYLNAAEIPIAQVMDLEPQENRITVGFNNYQAAYDMTSTLLASGK
QHIVYFGSMSDARDRKRYQGYSQAVTDAGFTPLHITPNKVSSVSIGAGMLALARQMYPDV
DAIFCTNDDMAVGVLQECLKLGVAIPAEMAISGFHGLDIGQATTPILASVTTPRFEMGKV
AAEILIKKIKKIPTIEQVDLHYRLSLGGTI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccagcgagttacgttacaggatatcgcgttactggcgggcgtgactaaaatg
acagtcagccgctatttacggatgccggaaaaagtggcaccagaaaccggtgagcgcatt
gctcaggtgatggctgaagtgaattacagtgcggatcccgaaagtgaaaccagcctaaat
cagaaaagtccgcgtattggtattttggtcccctcgtttaataaccaaatcttctccgat
ctgctggcagggattgaatcaatcaccgttgccaatggctatcagacgttggtggttaac
tataactacaataaagcgcgggaagaggagcagattattaacctgctctcctgtcagata
tccggcttgatcctcacagattccgaacataccttacgcgcagataaatatttgaatgca
gcagagattccgattgcacaagtgatggatctggagccgcaagagaatcgaataaccgtt
ggttttaataactatcaagcggcttacgacatgacgagcacgctgttggctagcggcaag
caacatattgtttattttggctcaatgtcagatgcgcgtgatcgtaagcgttatcagggc
tatagccaggcggtgactgatgcgggcttcacaccgctgcacattaccccaaataaagtg
tcctccgtctctattggcgcagggatgctggcattggcgaggcaaatgtatcccgatgtc
gatgctattttttgtactaatgatgatatggctgtcggagtgttacaagaatgtctgaaa
ctgggggtggcaataccggctgaaatggcgatttccggtttccatgggttggatatcggt
caggcgacaacaccaatattagccagtgtgaccacaccgcgttttgaaatggggaaagtt
gccgccgaaattttgattaagaaaatcaaaaaaatcccgactattgaacaggttgacctg
cattatcgtctctctctcggtgggactatctga
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