Yersinia pseudotuberculosis ATCC 6904: DJ40_4008
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Entry
DJ40_4008 CDS
T03307
Name
(GenBank) periplasmic binding s and sugar binding domain of LacI family protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypq03000
]
DJ40_4008
Transcription factors [BR:
ypq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DJ40_4008
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
cpSF2-GREB1
TetR_N
PucR
Motif
Other DBs
NCBI-ProteinID:
AIN14839
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Position
complement(4499166..4500170)
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AA seq
334 aa
AA seq
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MSKAYSNATIVDIARRANVTNITVSRTFNQPGLVKQETREKIHAIAKELNYVPNAFAQGL
KRSSSQIIGIVTSSMYNPFYSELIQTVSRIARTQCYQIMLFDTDGSEEAEMEAIQALFGY
KACGILLSPVRDDKNYQPAYLDLAETYRVPLILIDRDIYNRQLSGVFLNNKEIGLLAGKY
LSEQPERKMLIIGGPAESEITRVRIEGIINALENKKNDVHIINGDYDFISQEAAVRDYLS
SPQNQPDYIIGLNGILTLGAIAICHELKIYNNIKFFSIDEPPKAADYGLHIAGVYHDTQM
LGEIAAELLFNAIKKPHNDQAVRREFFTGSLLTH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaagcttattcaaatgccacgattgtggatattgcccgtcgagctaatgtgaca
aacatcacggtttcccgtacttttaatcaacctggattagttaaacaagaaacccgtgaa
aaaattcatgctatcgcaaaagaacttaattacgtccccaatgcttttgctcagggatta
aaacgcagtagcagccaaattattggtattgtcaccagcagtatgtataaccctttttac
tctgaattaattcaaacggtctccagaattgcacgaacacagtgttatcaaattatgctg
tttgataccgatggcagtgaagaggcagaaatggaggctattcaggcgctatttggctat
aaagcctgtggaattcttttgtcaccggttcgcgatgataaaaactaccaaccggcctat
ctcgatttagccgaaacctatcgcgttccattgattcttattgatagagatatctataat
cggcaactgagcggagtatttcttaataacaaagagatcgggttactggcggggaaatac
ctgtctgagcagccagagaggaaaatgctaatcattggtgggcccgcagaatcagagata
acacgggtacgtattgaagggattatcaatgcgttagaaaataaaaaaaatgacgtgcat
attattaatggtgattacgattttatttcacaggaagctgccgttagagattatctctct
tcccctcagaatcaacctgattatattattggcttaaatggaattttgacacttggcgct
attgcaatttgtcatgaactgaaaatttataataatataaaattcttctcgattgatgaa
ccacctaaagcagcagattatggccttcatattgccggtgtttaccacgatacccagatg
ctgggggagattgctgcagaactcctttttaatgccattaaaaaaccccacaacgatcag
gcagtaagacgcgaattcttcaccggatctctgctcacccactaa
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