Yersinia pseudotuberculosis ATCC 6904: DJ40_514
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Entry
DJ40_514 CDS
T03307
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DJ40_514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypq03400
]
DJ40_514
Enzymes [BR:
ypq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DJ40_514
DNA repair and recombination proteins [BR:
ypq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DJ40_514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
CNNM
Motif
Other DBs
NCBI-ProteinID:
AIN13990
UniProt:
A0ABN5RAB6
LinkDB
All DBs
Position
551522..552133
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AA seq
203 aa
AA seq
DB search
MFYTYGETEINHLKRRDKKMAAAIERLGMLERPLSPDLFAALIRNIVDQQISVKAAQTVN
TRLTLLLGSITPATVAAASAEAIQRCGMTMRKAGYIKGAADAAINGSLDLSVIAQLPDNE
VITQLSRLDGVGVWTAEMLLISSLSRPDIVSWGDLAIRRGMMNLYRHKTLPRERFERYRR
RYTPYGTTASLYLWALSHKTLED
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgttctatacctacggcgaaacagaaataaatcatctgaaacggcgggataaaaaaatg
gccgcagctattgagcgtttggggatgttagagcgcccattatcgccggacttattcgct
gcattgatcagaaatattgttgatcagcaaatttcagttaaagcggcgcaaaccgttaat
acacgcttaaccctattattgggtagcatcacccccgccaccgttgccgctgcctccgcc
gaggcgattcaacgctgtggtatgaccatgaggaaagcgggttatattaaaggggcggcc
gatgcggccattaatggttcgctggatttatctgttattgcgcaattgcctgataacgag
gttattacacagctttcacgtcttgacggcgtaggggtttggacagcggaaatgctgttg
atctcctcattgtcacggccagatattgtcagttggggagatttagccatccgccgcggc
atgatgaatttatatcgccataaaaccctgccccgtgagcgtttcgagcgctatcgccgc
cgatataccccatacggaacaactgcctctctttatttatgggcgttgtcacacaaaacg
ctggaggattga
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