Yersinia pseudotuberculosis ATCC 6904: DJ40_823
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Entry
DJ40_823 CDS
T03307
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DJ40_823 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypq01007
]
DJ40_823 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypq03016
]
DJ40_823 (serS)
Enzymes [BR:
ypq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DJ40_823 (serS)
Amino acid related enzymes [BR:
ypq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DJ40_823 (serS)
Transfer RNA biogenesis [BR:
ypq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DJ40_823 (serS)
Prokaryotic type
DJ40_823 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC18_2nd
CCDC113_CCDC96_CC
LEKR1
DUF7568
Par-4_C
Phage_scaffold
Motif
Other DBs
NCBI-ProteinID:
AIN13092
UniProt:
A0ABN5RB98
LinkDB
All DBs
Position
complement(902151..903443)
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AA seq
430 aa
AA seq
DB search
MLDPNMLRNELDAVAEKLARRGFKLDVEVLRQQEERRKVLQVETESLQAERNSRSKQIGA
AKARGEDIEPLRLEVNALGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKNENDN
IEVSRWGEPRKYDFDVKDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQFM
LDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEESDNSNYALIPTAEV
PLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRPED
SMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISSCS
NMWDFQARRMQARYRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPDVLR
PYMGGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatatgctgcgcaatgagctagacgcagtcgccgaaaaactggctcgc
agaggttttaaacttgatgttgaggtgttgcgccaacaagaagagcgccgcaaagtttta
caggttgaaacagaaagtctgcaggcagaacgtaactcccgatcgaaacagatcggtgca
gcaaaggcgcgtggcgaagatatcgaaccattacgtctggaagtgaatgctctgggtgaa
aaactggatgccgctaaagctgagttggataagttacaaaacgaaatccgcgatttagcg
ctgtctatccctaatctgccagatgattcagtaccggtaggtaaaaacgagaatgacaat
attgaagtcagtcggtggggcgagcctcgcaaatatgacttcgacgtaaaagatcatgtt
tctctgggcgaaatggccggtggccttgattttgctgccgctgtgaaactgaccggcgca
cgctttgtggtgatgaaagggcaaattgcccgtatgcaccgtgctctgtctcagttcatg
ttagacctgcacaccgagaaacacggttatctggaagcttacgtcccttatctggttaat
catgccaccttgtacggtacgggtcagttacccaagtttggtgaagatctattccatact
aaaccgttggcagaagaatcagataacagtaactatgctttgattcctactgctgaagtt
ccgctgaccaacttggtgcgcgatgaaattttggaagaggattctctgccattgaagttg
accgcccatacaccatgcttccgttctgaagcaggttcctatggccgtgatacccgtggt
ttgatccggatgcatcaattcgacaaagttgaaatggtgcagatcactcgtccggaagat
tctatggccgcgctggaagagttgacagggcacgccgagaaagttctgcaattactggag
ttgccataccgcaaggtattgctgtgtacgggtgatatgggctttggctccagcaaaact
tacgatctggaagtatggttgccagcacaggacacttaccgcgaaatatcctcatgttct
aacatgtgggatttccaggcgcgccgtatgcaggcccgttatcgcaacaagaccgacaga
aagacgcgtttagtgcacacgctgaacggctctggtttggcggttgggcgtaccttggta
gcggtgttggaaaactatcaacaggcagatggtcgtatccaggtccctgacgtattacgt
ccatatatgggtggcttggaatatattggttaa
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