Yersinia pseudotuberculosis EP2/+: BZ20_2494
Help
Entry
BZ20_2494 CDS
T03678
Name
(GenBank) RHS repeat-associated core domain protein
Organism
ypr
Yersinia pseudotuberculosis EP2/+
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Ntox47
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AJJ06300
LinkDB
All DBs
Position
2814939..2819111
Genome browser
AA seq
1390 aa
AA seq
DB search
MFEAARVDDKLYHSSALAGFIIGSIIGAAVIFAAAAYAASIVLTGGATLVATGFIVGMGV
TTLGVVAGGLIRSVGEKIGSMCHHDVGQITTGSKNVKVNSKRAAHVELSTVACKDDSAIQ
RMAEGSSNIFINSKAAVRLEDKTTCDAVVDSASSNVTFGGGRVQYLDIKREISDEMRDLS
EKLFIVAGLAGGIFGAAKQAGCFGLKCLSKIALGEMAGAAAGYGLEKGVGAIAGYFGYPV
DVISGQKLLTGEGDDTDFILPGIFPLHWSRIYRSENHHVGALGQGWSLVWERSLRKEDDS
IVYQNDEGREIVFPLIKRGERYFSPTEHIWLARTERDTYAISSPFETCFIFEAFSEAGVA
KLASLEDLNGHALYFFYDDIGQLKKISTTSGYGVYCQYEKGRLVSVACVKGGTPGTLVRY
QYNEQHQLVSVTNREGQITRQFGYHGHLINKLADVRGLECRYTWADIGGTPRITHSATNL
GEQWQFDYDIDNQQTTLTDLNTGQTACWGYNAQHLITDYRDFDGGKYAFDYNDLNMPVRV
VLAGERTLVLVYDALARPIQITDPLKRETHIDYHRNSLRVVRRQYPDGQVWKGEYDRTGR
LLKENAPDGGVTLYHYPGASSLPERITNAVGAQTHLGWERHGQLTEHTDCSGKLTRYEYD
IDGHLLTVIDAENHSTHYSYNRLGQPTGVRYADGRKEQLRYNAQGLVEQFTDPVGRQLHW
RYNLRGQPVSFTDRLQREYRYRYDCHGQMIELDNANGGQYHFRWSSGGQLVEEQYPDNLV
RRYRYGESGMLMALETTAPTVDDLTVSRQVSFDYDAGGRMTQRLTGMSATRYDWDIMDRL
LLAERVPTAVGEQAGIVGNGVRLAYDKAGHLLTESGDLGAVTYQWDPLHHLAALTLPDGQ
TLSWLRYGAGHVSAIRHGDTLISEFSRDNLHREVSRTQGILTQYRDYDAMGRRLWQSAGS
DAPTVAADLLPRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSV
AEDFAYDNADNLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNITTRHAGGR
MQHFAYDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIKRGAEKTTRQTDFIWQG
LRLLQEQHADGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGK
HRWSGKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGR
FSTQDPIGLAGGVNLYQYGPNPLGWVDPWGLATYTSYEQARNAALKWLQDRGFKAETENL
GRFGDIKGKPVGMQTGNGKVGFRVEFDERSGAHINTWSGKEKGPHFQFEASEKTVKKIQK
GFDKKTNGRC
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcggcccgtgttgatgacaagctttatcattccagtgccttagcgggtttt
attattggctccattattggtgccgccgtgatttttgcggccgcggcttacgccgcctcc
attgttctcaccggcggggcgacgctggtcgctaccggctttattgtgggtatgggggtg
accacgctgggcgtcgttgccggtgggttaatacgctccgtgggcgaaaaaatagggagc
atgtgccatcacgatgtcggacaaattacgacagggtccaaaaacgttaaagtgaacagt
aaacgggcggcgcatgtcgagctcagtaccgtggcctgtaaagatgactccgccattcag
cgcatggccgaaggttcgtcaaatatctttattaacagtaaagccgccgttcgtctggaa
gataaaacgacctgtgatgcggttgtcgattccgcttccagtaatgtgacgtttggtggg
gggcgcgttcagtatctcgatattaaacgcgagatttctgatgaaatgcgtgatttgtca
gagaagctgtttattgtcgccgggctggcgggcggcatatttggggcggcaaaacaggcg
gggtgtttcggccttaaatgcctgagcaagattgcgttgggtgagatggccggggcggct
gccgggtatgggttggaaaaaggggttggggccatcgccggttatttcggttacccggtt
gatgtgatcagtggacagaaattgctgacaggtgagggcgatgataccgattttattctg
ccgggtatcttcccgctgcactggagccggatttatcgcagtgaaaatcaccatgtcggg
gcgctgggacaaggctggtctctggtatgggagcgttcattacgcaaagaagatgacagc
attgtttatcagaatgatgaaggtcgggagattgtctttcccctgattaaacgtggagag
cgctatttctcccccacggagcatatctggctggcacgtaccgagcgtgatacctatgcc
atcagcagcccgtttgaaacctgttttatttttgaggccttttctgaggctggcgttgcg
aaattagccagcctcgaagatctcaatggtcatgccctgtatttcttttatgacgatatc
gggcaactgaaaaaaatatcgaccaccagcggctatggggtgtattgccagtatgaaaaa
gggcgtctggtgtccgttgcctgcgtcaagggcggtacgccgggcacactggtccgctac
cagtataatgaacagcaccagttggtcagcgtcactaaccgtgaggggcaaatcacccgc
cagtttggttaccatggccatctgatcaataaactggcggatgtcagggggctggagtgc
cgttacacatgggctgatatcggcggaaccccgcgaattacgcacagtgccaccaatctg
ggggagcagtggcagtttgattatgatatcgacaatcaacagaccaccctgacggacctc
aataccgggcagaccgcctgctggggatataacgcccaacatttaattaccgactatcgg
gattttgatggcgggaaatatgcatttgactacaacgacctcaatatgccggtacgcgtt
gtgctggcaggcgagagaacgctcgttctggtttacgatgcactggcgcgcccgatccag
atcaccgatccgctaaaacgtgaaacccacattgattatcaccgtaacagtctgcgggtg
gtgcgccgtcagtaccctgacgggcaggtctggaagggggaatatgaccgtaccggccgt
ttgctgaaagagaacgcgccggatggcggggtgacgctttatcattatccaggggcctca
tcccttcctgaacgcataaccaatgccgtaggggcgcagacacaccttggttgggaaagg
cacgggcaactgacggagcacaccgactgctcgggtaaactgacccgctacgaatatgat
atcgatggccatctgctgacggtcatcgatgctgaaaaccattcaacacattacagctac
aaccgtctcgggcagcccaccggggtcaggtacgccgatggccgcaaagagcagttgcgg
tataacgctcaggggctggttgaacagtttaccgatcctgtcgggcggcagttgcactgg
cgttataacctgcggggtcagccggtcagctttactgatcgtctgcaacgggaataccgt
taccgctatgactgccatgggcagatgattgagctggataatgccaatggtggccagtat
cacttccggtggagcagtggcgggcaattggtggaagagcagtatcccgataaccttgtc
cggcgttatcgctatggggagagcgggatgctgatggcgctggagaccaccgcgcccacg
gttgacgatcttaccgtctcccggcaggtcagttttgactatgatgcgggcgggcgaatg
acgcagcgcctgacgggcatgagtgcgacccggtatgactgggacattatggaccgttta
ttgctggccgagcgtgtgccaacggcggtgggcgaacaggcggggatcgtcggtaatggt
gttcgtttggcgtatgacaaggccgggcatttactgacggaaagcggtgacctgggtgcg
gtgacgtatcagtgggatccgctgcatcacctggccgccctgacgctgcccgatggtcag
acgctgtcatggttgcgttacggtgcgggccatgtcagtgccattcgtcatggtgatacg
cttatttccgagttcagccgggataatcttcatcgggaagtgagccggacccagggtatt
ttgacgcagtatcgtgattatgacgcgatggggcggcggttgtggcaatcggcgggttct
gatgcgccgacagtggcggccgatctgctgccccgtcagggggatatctggcgtaaattt
agctttgacactgccggtgaactgagcatggccaccgattttatccggggtgagcagcag
taccgttatgatgcggaagggcggctgactgacagccgggagcgtcatcagttatccgtt
gcggaggattttgcttacgacaatgcggataacctgctgaacctgaggaaactgccgttt
gatacggtcgatccactgtacgatacaccggtcgccaacaaccgtttgacgcaatggcag
cattaccgttttgagtatgatgcctggggaaacatcaccacgcggcatgccggtggtcgg
atgcaacattttgcctatgacgatgataaccggctgctgcgggcctggggaaccgggccg
ttaggggagcatgacagccactatcggtatgatgcgctggggcggcgtatccacaaatcg
gtgacgataaagcgcggcgcagaaaaaaccacccgtcagaccgattttatctggcagggg
ttgcggttattgcaggagcaacatgcggacggcaacgcgacctatatttacgacccgaac
gaaagttatacgccgctggcgcgggtcgatcagcgtcatggcgagacagaaagtcaggtg
tattattttcatacggatatcaacggtaccccgctggatgtcacggacggagagggtaag
caccgctggtcagggaaataccacgcctggggcaaagttacccggcagaatgtcagcgat
ccaaggcaaagcacggtcagccggttcgcgcagccgctgcgttatccggggcaatacagt
gatgacgagacgggtttgcactacaatacgttcaggtactatgacccggagatagggcga
tttagtacgcaggacccgatagggctggcggggggggtgaatctttatcagtatgggcca
aatccgctaggttgggtggatccttggggcttggctacatatacatcatatgagcaagca
agaaatgcagctctaaaatggctacaagatagagggtttaaggctgaaactgaaaatctt
ggtcgttttggtgatataaaaggcaaacctgttggaatgcaaacgggcaatggaaaagtt
ggatttagggtcgagttcgatgagcgaagtggggctcatattaatacatggtcaggtaag
gaaaaaggtcctcatttccaatttgaagcaagtgagaaaactgttaaaaaaattcaaaaa
ggatttgataaaaaaacgaatggaaggtgctaa
DBGET
integrated database retrieval system
