Yersinia pseudotuberculosis EP2/+: BZ20_3840
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Entry
BZ20_3840 CDS
T03678
Symbol
kdgR
Name
(GenBank) pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ypr
Yersinia pseudotuberculosis EP2/+
Brite
KEGG Orthology (KO) [BR:
ypr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypr03000
]
BZ20_3840 (kdgR)
Transcription factors [BR:
ypr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
BZ20_3840 (kdgR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_24
HTH_5
MarR_2
Rrf2
Fe_dep_repress
PadR
Mga
HTH_45
HTH_11
MarR
Motif
Other DBs
NCBI-ProteinID:
AJJ07119
UniProt:
A0A0T9JEK0
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All DBs
Position
4380090..4380881
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AA seq
263 aa
AA seq
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MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSNETRETIHLGALDEDSIVY
IHKIDSMYNLRMHSRIGRRNPLHSTAIGKVLLAWRDRGEVEEILSHIEFTRSTKYTLDST
AALLPVLDKVREQGFGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFAEDRKSD
YVKSLHCAARNISEQMGYRDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatctagataaacagcccgactctgtctcgtcggtgctgaaggttttt
ggcatattacaagcgttgggtgaagaacgggaaataggtattaccgagctttctcagcga
gtcatgatgcctaagagtacagtttatcgttttctccaaaccatgaagtccttgggttat
gtggcacaggaaggcgaatcggagaaatattccctcaccctgaagctatttgaattgggt
gcgaaagcgctgcaaaatgtcgatttgattcgcagtgctgatattcagatgcgtgaatta
tctaatgaaactcgtgaaactattcacttgggtgcattggatgaagatagcattgtgtat
attcataaaattgactcgatgtataacctgcgaatgcattcccgcattggccgccgcaac
ccattacacagtactgccattgggaaggtgctattagcctggcgtgatcgtggtgaagta
gaagaaattctgtctcatatcgaatttacccgcagcaccaaatatacgttggatagcact
gctgcactgttaccggttttagataaggtacgtgagcaagggtttggtgaggatattgaa
gaacaggaagaaggtttgcgttgtatcgcagttcctgtctttgaccgttttggtgtggtg
attgccggattaagtatttctttcccgacactacgtttcgctgaagacagaaagagtgat
tacgttaaatcgttacattgcgcagcccgcaatatttctgagcaaatgggttaccgcgat
tatcctttctga
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