Yersinia pseudotuberculosis EP2/+: BZ20_53
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Entry
BZ20_53 CDS
T03678
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ypr
Yersinia pseudotuberculosis EP2/+
Brite
KEGG Orthology (KO) [BR:
ypr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypr03016
]
BZ20_53 (rnd)
Enzymes [BR:
ypr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BZ20_53 (rnd)
Transfer RNA biogenesis [BR:
ypr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BZ20_53 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AJJ05827
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All DBs
Position
complement(60854..61975)
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AA seq
373 aa
AA seq
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MNYQLITTNNALQQVCEQARTHAHIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TEWQPFRALLQDLNVVKYLHAGSEDLEVFLNAFDQMPTPMIDTQVLAAFSGRSLSCGFAM
LVAEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLAAKLVEATEAAGRMDAAK
DECLLLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLAEWRLRQARERDLAVNFVVR
EEHLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPIANLIDQ
PGYKKVFKDIKALIQSVSERSGLSSELLASRRQINQLLNWHWKLKLSDAQPELLTGWRGD
LLSSELLEILQHY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacgaccaataacgcattgcaacaggtctgcgaacaagcccgg
acacatgctcacatcgcgttggatacagagtttgtcagaacgcgcacttactaccctcag
ttgggtttgattcaactgtatgatggtgaacaactctcacttatagatccattacctatc
acggaatggcagccttttcgcgcgttactgcaagatctgaatgtggtgaaatatttacac
gcaggcagtgaagatctcgaagtgtttttaaacgcttttgaccagatgccaaccccgatg
attgatactcaggtattagcggcattttctggccgtagcctatcctgcggctttgccatg
ctggtggctgagtttgaaggtgttgagttagataaaagtgaatcacgtacagactggatt
gcccggccgttgagtgaaaaacagtgcgattatgcggcggctgatgtgttttatctttta
cctctggcggctaaattagtcgaagccactgaggcggcagggcggatggacgcggcgaaa
gacgaatgtctattgctgtgccgccgtcggagtgagacgctcgatcctgaactggcttac
cgtgagattaccaatgcctggcaactccgtggccatcaactggcatgtttgcagaaatta
gccgaatggcgtttacgtcaggcacgggagcgggatttggcggttaactttgtggttagg
gaagagcacctgtggcaagttgcccgctatcaaccaacatcactcggtgagttagattct
cttggcttgagtgggcaggagatccgctatcacgggcgaacattgctggcactggtcgcc
gaagggaatgccgtccctgaagatcagcttcctcccccgattgctaacttgattgaccaa
ccggggtacaaaaaagtctttaaagatattaaagccttgattcaatcggtcagtgaacgt
agcggattaagcagtgaattactggcatcacgtcgccaaattaatcagttactcaattgg
cactggaagttgaagctttcagatgctcaacctgaattattaacaggctggcgtggcgat
ttattgtcttctgaattgcttgaaatcttacaacactattaa
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