Yersinia pseudotuberculosis EP2/+: BZ20_542
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Entry
BZ20_542 CDS
T03678
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ypr
Yersinia pseudotuberculosis EP2/+
Brite
KEGG Orthology (KO) [BR:
ypr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypr01002
]
BZ20_542
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypr01011
]
BZ20_542
Peptidases and inhibitors [BR:
ypr01002
]
Cysteine peptidases
Family C82
BZ20_542
Peptidoglycan biosynthesis and degradation proteins [BR:
ypr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BZ20_542
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJJ06459
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Position
complement(604216..606066)
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AA seq
616 aa
AA seq
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MIKRKLQRALVLYCALVCSLMTVFTASAAAPVMPVDSSSALPARGATMSVAQSRSQLLAA
LPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGIQPQFMQWVKWLSE
PEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEG
STASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDR
TGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAA
PAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLA
LNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVV
VNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNF
PYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLAN
MLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM
VRSGAQISQQAEFLLQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagaaagttacaacgcgcactcgttttatactgcgctttagtttgcagcctg
atgaccgtgtttactgcatcagccgctgctcccgtaatgcccgtggattcatcttcagct
ttgccagcacgtggtgcaaccatgtccgtggctcaaagtcgttcgcaattattggccgcg
cttccaaaagatgtcgtgccactctatgccgcggaattagcgtcattatatgcggcgaac
caaatgcagcctatgtggcaagaccgggttgctgttcaacgtttccagcaacagttagcg
gaggttggactttcaggcattcaaccgcagtttatgcaatgggttaaatggttgagcgag
ccagaaatcaccggtatggcgcgtgatattattctatcggatgcgatgctgggttattta
cactttatttccggtgtcggtgctaatggcagtgtttggttatacagtaatgtgccttac
aaaatggccatgccgcctgcagcagttttaaacgcctggcagaaagcggtcaatgaaggc
tcgacagcctcttatctggcgtcgttggctccgcagcatccgcaatacgataaaatgcaa
caggcgttgaagttgatgctagcagaccgacgcccgtggccacagatgcctactgggcca
agtttacggccggggcaacttagcgacgatatccctgcattgcgggaaatccttgaccga
acgggtatgttgcacccaacaacccccgtgaaagcgccagaggtgatccctgtggagaac
cctacggtggccgtcgttaatgacgatctctctgttgatgaagaaaaaaatcggactcag
accaacagcttggtggtcagcccatcagccgtctctgtccctgagagcgatgatgcggca
cccgcaccgatgcctcccgtgagcgtggtcacgttaactgacaatatctatactcctgag
ttggtagaagccgttaaacgcttccagcaatggcaggggctcactgatgacggtgttatc
ggcccccgtacccgcgaatggttgaatgtctcgccacaaacgcgggccacgttattggca
ttgaatatccagcgattacgtattttgccggggcatgttgataacgggattatggttaat
atcccaaattattctctgaattattataaagatggggccgaagtgctttcatctcgggtg
attgttggccgtccaagtcgtaaaacgcccctgatgagtagtgcgttgaataatgtggtg
gtgaacccgccgtggaacgtgccgacctcattggtacggcaggatatcgtgcccaaagca
cgtaacgatgccgggtattttcagcgtaatggctataccgtgttgtccggatggagtaat
gatgctgaagtgatcaatccttcaatgattgactggagtattatctcgccgaataacttc
ccttaccgtttgcgtcaggcaccaggtgctaataactcgttagggcggttcaaatttaac
atgccaagttctgatgctatctatttacatgacacgccgaatcatggcctgttccaaaag
gacattcgcgccctgagttcaggttgtgtccgtgtcaataaagcgtctgatttagcgaac
atgctgctgcaagatgctggctggaatgatgcacgggtctcttccaaggtaaaacaaggt
gataccacctacgtcaatatccgccagcgcgttccggtgcaattgtattatctgacagca
tgggttgcggaagacggtaaaccgcagtttagaacagatatttacaattatgataaaatg
gtgcgatctggtgcacaaatctcacagcaggctgagtttttattgcaataa
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