Yersinia pseudotuberculosis EP2/+: BZ20_926
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Entry
BZ20_926 CDS
T03678
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ypr
Yersinia pseudotuberculosis EP2/+
Pathway
ypr03030
DNA replication
ypr03430
Mismatch repair
ypr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZ20_926 (holA)
03430 Mismatch repair
BZ20_926 (holA)
03440 Homologous recombination
BZ20_926 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypr03032
]
BZ20_926 (holA)
03400 DNA repair and recombination proteins [BR:
ypr03400
]
BZ20_926 (holA)
Enzymes [BR:
ypr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZ20_926 (holA)
DNA replication proteins [BR:
ypr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BZ20_926 (holA)
DNA repair and recombination proteins [BR:
ypr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BZ20_926 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AJJ08749
LinkDB
All DBs
Position
1026388..1027422
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQHDFTEHFSFALDAHTE
WEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKLSSLLHPDILLILRANKLTKA
QENSAWFKALSKNGVFVSCQTPEQAQLPRWVSARAKSLNLNVDDAAIQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLMGKSKRAWHILQQLQQED
SEPVILLRTVQRELLLLLALKRQMEQVPLRALFDQHKIWQNRRPMMTQALQRLSLQQLQQ
AVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatttaccctgaacaacttgtcgcgcagctccatgaggggctacgcgcttgt
tatctattgtgtggcaatgaacccttgttgctacaggaaagtcaggaccacattcgtcgg
gtggcatcgcagcacgatttcactgagcatttcagctttgcgttggacgcgcacaccgaa
tgggagcatatttttagcctttgccaggcactgagtttgttcgccagccgccagacactg
ctgctgagtttcccagacagtgggctgaccgcgccaattagcgagcagttggttaaatta
tctagcctgttacacccagacattttattgatattgcgggcgaataagttgaccaaagcg
caagagaacagcgcctggtttaaagctctcagtaaaaatggggtatttgtcagttgccag
acaccagaacaggcccagcttccccgctgggtgagcgctcgcgccaagagcctcaacttg
aacgtagacgatgccgccattcaattactttgctactgctatgaaggtaacttgctggcc
ttatctcaggcgttagaacggctctcgctgctctaccccgacggtaagttaaccctgcct
aaagtagaacaagccgtcaacgacgctgcgcatttcacaccataccattggcttgatgcc
ttgttgatggggaagagcaagcgggcttggcatattttgcagcaattacagcaagaagac
agtgaacccgttattttactgcgtaccgtacaacgtgaactgctcctgctgttagcgctc
aaacgtcagatggaacaagttccattgcgcgcattattcgatcaacacaaaatttggcag
aaccggcggcccatgatgactcaggcactgcaacggctctcccttcagcaactgcaacag
gcggttcatctgctcacacagatggaaatccggctgaaacaggattatggtcaatcaatc
tggcctgagttagaaacgctatctatgctgatgtgtggaaaaacattacctgagagcttt
tttgatgcccattaa
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